RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ADI1Q9BV57 179 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 NINJ2Q9NZG7 142 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 SLC25A10Q9UBX3 287 aaPredicted RBP3.55□□□□□ -1.84
SMC6-208ENST00000481708 ZNF212Q9UDV6 495 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 ADAM18Q9Y3Q7 739 aa3.55□□□□□ -1.84
SMC6-208ENST00000481708 NOTOA8MTQ0 251 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 KIF28PB7ZC32 967 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 RAB27BO00194 218 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 GCNT3O95395 438 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 OLFM2O95897 454 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 TPOP07202 933 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 GJB1P08034 283 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 HMOX1P09601 288 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 CPA1P15085 419 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 TBXAS1P24557 533 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 PBLDP30039 288 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 GATA4P43694 442 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 RNASE9P60153 205 aaKnown RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 BFSP1Q12934 665 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 MYO1EQ12965 1108 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 BOP1Q14137 746 aaKnown RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 PUM1Q14671 1186 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMC6-208ENST00000481708 TRIM71Q2Q1W2 868 aaKnown RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 C5orf22Q49AR2 442 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 TBC1D9BQ66K14 1250 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 CRELD2Q6UXH1 353 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 ZNF280BQ86YH2 543 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 OR6B3Q8NGW1 331 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 CNDP1Q96KN2 507 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 SNX27Q96L92 541 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 UIMC1Q96RL1 719 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 SYT3Q9BQG1 590 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 HTATIP2Q9BUP3 242 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 LRRC4CQ9HCJ2 640 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 TBCCD1Q9NVR7 557 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 POLR3BQ9NW08 1133 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 P4HTMQ9NXG6 502 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 CGNQ9P2M7 1197 aaKnown RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 MYH4Q9Y623 1939 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ZNF521Q96K83 1311 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ARID2Q68CP9 1835 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 A0A0A6YYJ9 748 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 hCG_1809904A0A1W2PP81 198 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 A0A1W2PPE2 198 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 A0A1W2PR64 198 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 RGSL1A5PLK6 1076 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 GOLGA6L6A8MZA4 724 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 FTCDO95954 541 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 PLATP00750 562 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 MTHFRP42898 656 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 TOB1P50616 345 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 PTTG1IPP53801 180 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 CRB2Q5IJ48 1285 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 STEAP3Q658P3 488 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 OTOAQ7RTW8 1153 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 GATAD2AQ86YP4 633 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 GRK7Q8WTQ7 553 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 RUFY2Q8WXA3 655 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ASB11Q8WXH4 323 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ATP2A3Q93084 1043 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 KIF1BPQ96EK5 621 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ZDHHC12Q96GR4 267 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 SUCLG2Q96I99 432 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 COG3Q96JB2 828 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 IWS1Q96ST2 819 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 DBNDD2Q9BQY9 259 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ZNF518BQ9C0D4 1074 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 STN1Q9H668 368 aaKnown RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 ATP13A1Q9HD20 1204 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 SLC39A2Q9NP94 309 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 DKK4Q9UBT3 224 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 DERAQ9Y315 318 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 RRP7AQ9Y3A4 280 aaKnown RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 TSC2P49815 1807 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 SALL1Q9NSC2 1324 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 PRUNE2Q8WUY3 3088 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 SCN10AQ9Y5Y9 1956 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 OR2W5A6NFC9 320 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 AGPSO00116 658 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 SYN3O14994 580 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 MUSKO15146 869 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 MYO1BO43795 1136 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 STAM2O75886 525 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 TACR1P25103 407 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 IL15P40933 162 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 CEBPZQ03701 1054 aaKnown RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 MGAT5Q09328 741 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 DBPQ10586 325 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 CAMK2DQ13557 499 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ZIK1Q3SY52 487 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 KBTBD12Q3ZCT8 623 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 DCAF17Q5H9S7 520 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 ADALQ6DHV7 355 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 PLAG1Q6DJT9 500 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ABRAXAS1Q6UWZ7 409 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 CPLX4Q7Z7G2 160 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 FAM83AQ86UY5 434 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 CCDC117Q8IWD4 279 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 CDYL2Q8N8U2 506 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 IL17RCQ8NAC3 791 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms