RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 NPLQ9BXD5 320 aaPredicted RBP10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 PACSIN1Q9BY11 444 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 ZC3H12CQ9C0D7 883 aaKnown RBP10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 NAPBQ9H115 298 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 BRD9Q9H8M2 597 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 VRTNQ9H8Y1 702 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 KBTBD4Q9NVX7 518 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 AMFRQ9UKV5 643 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 ST14Q9Y5Y6 855 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 C17orf113A0A1B0GUU1 675 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 ARHGAP42A6NI28 874 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 FOXO6A8MYZ6 492 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 PTP4A3O75365 173 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 KATNA1O75449 491 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 HSPD1P10809 573 aaKnown RBP10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 MCF2P10911 925 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 FGFR1P11362 822 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 CETPP11597 493 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 CTNNA2P26232 953 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 LRPAP1P30533 357 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 ARL4CP56559 192 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 JAM2P57087 298 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 ERVK-21P61565 698 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 VAC14Q08AM6 782 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 TRAF2Q12933 501 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 BAMBIQ13145 260 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 ZNF124Q15973 351 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 KRT80Q6KB66 452 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 GADL1Q6ZQY3 521 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 KIAA0408Q6ZU52 694 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 DPP9Q86TI2 863 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 FIBCD1Q8N539 461 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 LEMD2Q8NC56 503 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 TEX47Q8TBZ9 253 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 NKD2Q969F2 451 aaPredicted RBP10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 ZNF597Q96LX8 424 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 CCDC8Q9H0W5 538 aaPredicted RBP10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 ZC4H2Q9NQZ6 224 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 HOMER2Q9NSB8 354 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 POMPQ9Y244 141 aa10.62□□□□□ -0.71
PRPF4B-206ENST00000481109 CHD4Q14839 1912 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 BTN3A1O00481 513 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 DDX3YO15523 660 aaKnown RBP10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 SNAPINO95295 136 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 ACTN1P12814 892 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 ZNF182P17025 639 aaPredicted RBP10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 AOC1P19801 751 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 OPRL1P41146 370 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 LEPRP48357 1165 aaKnown RBP10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 ERFP50548 548 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 RCAN1P53805 252 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 SLC12A2P55011 1212 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 AP1S2P56377 157 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 GSTO1P78417 241 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 SLC1A5Q15758 541 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CYP1B1Q16678 543 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CLEC16AQ2KHT3 1053 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 BRDTQ58F21 947 aaPredicted RBP10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CACHD1Q5VU97 1274 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 STYK1Q6J9G0 422 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 TBC1D21Q8IYX1 336 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CCDC33Q8N5R6 958 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 MAGEB6Q8N7X4 407 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 SLC9A6Q92581 669 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 TMEM87BQ96K49 555 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CITED4Q96RK1 184 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CHID1Q9BWS9 393 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 TSSK1BQ9BXA7 367 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 UCK1Q9HA47 277 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 ERVK-5Q9HDB9 667 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 TBX22Q9Y458 520 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 ASTN2O75129 1339 aaPredicted RBP10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 A0A0G2JMP0 313 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 ARHGEF37A1IGU5 675 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 AURKAO14965 403 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 THAP12O43422 761 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CCNKO75909 580 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 EIF2AK2P19525 551 aaKnown RBP10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CA4P22748 312 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 TYK2P29597 1187 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 RPA3P35244 121 aaPredicted RBP10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 RACK1P63244 317 aaKnown RBP10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CENPCQ03188 943 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 NAB1Q13506 487 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 ARHGEF16Q5VV41 709 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 PRR23BQ6ZRT6 265 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 TOM1L2Q6ZVM7 507 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 ILDR2Q71H61 639 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 ATG9AQ7Z3C6 839 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 RNF135Q8IUD6 432 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 GALNT12Q8IXK2 581 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CCDC105Q8IYK2 499 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 SNX31Q8N9S9 440 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 KCT2Q8NC54 265 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 SLCO2A1Q92959 643 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 NGLY1Q96IV0 654 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 PIP5K1AQ99755 562 aa10.61□□□□□ -0.71
PRPF4B-206ENST00000481109 CCDC106Q9BWC9 280 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms