RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 FOXN1O15353 648 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 MGRN1O60291 552 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 FAM20BO75063 409 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CPA2P48052 419 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TRAF2Q12933 501 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 MCOLN3Q8TDD5 553 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ATL1Q8WXF7 558 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 USP7Q93009 1102 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 PRMT3O60678 531 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 HIST1H2ABP04908 130 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 NTSP30990 170 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 PEX6Q13608 980 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 RASA2Q15283 850 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 VPS72Q15906 364 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 INTS11Q5TA45 600 aaKnown RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 AGMOQ6ZNB7 445 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 HIST3H2AQ7L7L0 130 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 AADATQ8N5Z0 425 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TC2NQ8N9U0 490 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 UTP15Q8TED0 518 aaKnown RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 HIST1H2ACQ93077 130 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 Q96MT0 163 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 MRPL9Q9BYD2 267 aaKnown RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 EFCAB10A6NFE3 127 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 SERPINE1P05121 402 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CXCR2P25025 360 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TCEA2Q15560 299 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ARHGAP22Q7Z5H3 698 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 FBXO36Q8NEA4 188 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 MYCBPAPQ8TBZ2 947 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 NSMCE2Q96MF7 247 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TRIP11Q15643 1979 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 GPR75-ASB3A0A0A6YYF3 556 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 FXR1P51114 621 aaKnown RBP eCLIP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CCNG2Q16589 344 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ATG9AQ7Z3C6 839 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CBWD2Q8IUF1 395 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ATP8B4Q8TF62 1192 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 SMARCD1Q96GM5 515 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 GPRC5DQ9NZD1 345 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 EIF4E1BA6NMX2 242 aaKnown RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 MSH4O15457 936 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 LDLRP01130 860 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF7P17097 686 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 KLHL17Q6TDP4 642 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 AP3S1Q92572 193 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 GJD4Q96KN9 370 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TMEM79Q9BSE2 394 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 INTS13Q9NVM9 706 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 PRR36Q9H6K5 1346 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 A0A087X1B8 175 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TGFB3P10600 412 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ALDH9A1P49189 494 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 HK2P52789 917 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 RHOAP61586 193 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 COPZ1P61923 177 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 IL5RAQ01344 420 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 DHFR2Q86XF0 187 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CASKIN2Q8WXE0 1202 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ETAA1Q9NY74 926 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 PRKAG3Q9UGI9 489 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 LRCH1Q9Y2L9 728 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 FGFR2P21802 821 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 PON1P27169 355 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 PTPN4P29074 926 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 KCNJ1P48048 391 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 LPCAT2Q7L5N7 544 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ACTRT2Q8TDY3 377 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CELF4Q9BZC1 486 aaKnown RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 LRRC4BQ9NT99 713 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CEP250Q9BV73 2442 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 IGSF6O95976 241 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TFRCP02786 760 aaKnown RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 LBPP18428 481 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 NEK3P51956 506 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 OASLQ15646 514 aaKnown RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 RETSATQ6NUM9 610 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 FBXO42Q6P3S6 717 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ADHFE1Q8IWW8 467 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 UXTQ9UBK9 157 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 SPTA1P02549 2419 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CCDC154A6NI56 674 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 CDH17Q12864 832 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 FAM187BQ17R55 369 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 FIGNQ5HY92 759 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TMPRSS6Q8IU80 811 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF655Q8N720 491 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 AHCYL2Q96HN2 611 aaKnown RBP9.75□□□□□ -0.85
VEGFA-212ENST00000480614 TMEM120AQ9BXJ8 343 aa9.75□□□□□ -0.85
VEGFA-212ENST00000480614 SREBF1P36956 1147 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 OTUD4Q01804 1114 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 TOP3AQ13472 1001 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 IZUMO1Q8IYV9 350 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 TAS2R13Q9NYV9 303 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ATP6V1HQ9UI12 483 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 HEATR1Q9H583 2144 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 SNRNP200O75643 2136 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 CES2O00748 559 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 KPNA5O15131 536 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 HALP42357 657 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms