RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 GIPC1O14908 333 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 LSM1O15116 133 aaKnown RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 HTRA2O43464 458 aaPredicted RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 TADA2AO75478 443 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 RALBP11234 206 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 NFKBIAP25963 317 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 ARRB2P32121 409 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 MAGEA3P43357 314 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 PSMD8P48556 350 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 BMXP51813 675 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 ZNF132P52740 706 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 GALNT2Q10471 571 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 GRAPQ13588 217 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 NOMO1Q15155 1222 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 NRF1Q16656 503 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 NHSL2Q5HYW2 709 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 IL23RQ5VWK5 629 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 SLC39A4Q6P5W5 647 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 FRA10AC1Q70Z53 315 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 BRINP3Q76B58 766 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 C10orf107Q8IVU9 208 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 PDPRQ8NCN5 879 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 GRAPLQ8TC17 118 aaPredicted RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 SPATA18Q8TC71 538 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 ZNF516Q92618 1163 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 GBA3Q9H227 469 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 PRDM16Q9HAZ2 1276 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 GPRC5CQ9NQ84 441 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 MAN1C1Q9NR34 630 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 CYP26B1Q9NR63 512 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 HACD3Q9P035 362 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 COPG2Q9UBF2 871 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 SEPT3Q9UH03 358 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 CCPG1Q9ULG6 757 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 CTDP1Q9Y5B0 961 aaPredicted RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 TMEM114B3SHH9 223 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 CFAP99D6REC4 459 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 TRIM38O00635 465 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 SPTLC1O15269 473 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 KLHL41O60662 606 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 ARP10275 920 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 PABPC1P11940 636 aaKnown RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 HSPA1LP34931 641 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 HK2P52789 917 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 SNAP25P60880 206 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 GRSF1Q12849 480 aaKnown RBP eCLIP10.92□□□□□ -0.66
SIK3-210ENST00000480468 ATP1A4Q13733 1029 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 NR1D2Q14995 579 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 SMYD5Q6GMV2 418 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 SPOPLQ6IQ16 392 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 ANKRD26P1Q6NSI1 321 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 DARS2Q6PI48 645 aaKnown RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 ARMCX6Q7L4S7 300 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 RFX6Q8HWS3 928 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 PACRGLQ8N7B6 248 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 MINDY2Q8NBR6 621 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 CMASQ8NFW8 434 aaPredicted RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 ZNF606Q8WXB4 792 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 TFAP2CQ92754 450 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 ASB9Q96DX5 294 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 ANKRD36BP1Q96IX9 119 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 DHRS1Q96LJ7 313 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 ZNF641Q96N77 438 aaPredicted RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 EBNA1BP2Q99848 306 aaKnown RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 NPLQ9BXD5 320 aaPredicted RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 TPK1Q9H3S4 243 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 WDR41Q9HAD4 459 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 TCF7L2Q9NQB0 619 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 ARHGAP28Q9P2N2 729 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 PACSIN3Q9UKS6 424 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 NRAPQ86VF7 1730 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 KAT6AQ92794 2004 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 LRCH4O75427 683 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 GCATO75600 419 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 TOP3BO95985 862 aaKnown RBP10.91□□□□□ -0.66
SIK3-210ENST00000480468 C4BPAP04003 597 aaKnown RBP10.91□□□□□ -0.66
SIK3-210ENST00000480468 PRKCGP05129 697 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 MX2P20592 715 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 JAK1P23458 1154 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 IL1R2P27930 398 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 CDH5P33151 784 aaPredicted RBP10.91□□□□□ -0.66
SIK3-210ENST00000480468 CDH15P55291 814 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 NAB1Q13506 487 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 PDE1CQ14123 709 aaPredicted RBP10.91□□□□□ -0.66
SIK3-210ENST00000480468 SLC9B1Q4ZJI4 515 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 AARS2Q5JTZ9 985 aaKnown RBP10.91□□□□□ -0.66
SIK3-210ENST00000480468 XKR5Q6UX68 686 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 C4orf22Q6V702 233 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 CNTD1Q8N815 330 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 TMEM35BQ8NCS4 154 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 C1orf50Q9BV19 199 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 ZNF385DQ9H6B1 395 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 RSAD1Q9HA92 442 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 RAB6BQ9NRW1 208 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 RIC8BQ9NVN3 520 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 MOCS1Q9NZB8 636 aa10.91□□□□□ -0.66
SIK3-210ENST00000480468 SUCOQ9UBS9 1254 aaKnown RBP10.91□□□□□ -0.66
SIK3-210ENST00000480468 A0A1W2PPW3 197 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms