RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SAE1Q9UBE0 346 aaPredicted RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 ZMYM5Q9UJ78 669 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 AGO1Q9UL18 857 aaKnown RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 MYO9BQ13459 2157 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 CLUHO75153 1309 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 EFCAB8A8MWE9 144 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 APOC4-APOC2K7ER74 178 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 LEFTY2O00292 366 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 GREM1O60565 184 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 APOC2P02655 101 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 TACR2P21452 398 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 TGM2P21980 687 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 FSHRP23945 695 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 HTR7P34969 479 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 SNX1Q13596 522 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 CBX2Q14781 532 aaPredicted RBP18.14■□□□□ 0.49
UPF3A-206ENST00000480362 CCNG2Q16589 344 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 CTC1Q2NKJ3 1217 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 RWDD4Q6NW29 188 aaKnown RBP18.14■□□□□ 0.49
UPF3A-206ENST00000480362 POTEHQ6S545 545 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 NPNTQ6UXI9 565 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 LRRC31Q6UY01 552 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 EP400NLQ6ZTU2 488 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 CHSY1Q86X52 802 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 ZNF683Q8IZ20 524 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 TTC16Q8NEE8 873 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 ATG4AQ8WYN0 398 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 ADAM7Q9H2U9 754 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 LRRC19Q9H756 370 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 HOMER3Q9NSC5 361 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 CLDND1Q9NY35 253 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 CFAP97Q9P2B7 532 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 CDH22Q9UJ99 828 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 VANGL2Q9ULK5 521 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 ARHGAP26Q9UNA1 814 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 SH3BP1Q9Y3L3 701 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 MFHAS1Q9Y4C4 1052 aa18.14■□□□□ 0.49
UPF3A-206ENST00000480362 DCLK1O15075 740 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 PECAM1P16284 738 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 HOXC13P31276 330 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 SLC6A4P31645 630 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 COILP38432 576 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 OTUD4Q01804 1114 aaKnown RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 DLX2Q07687 328 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 FAM133BQ5BKY9 247 aaKnown RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 TEX35Q5T0J7 233 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 NCBP2-AS2Q69YL0 99 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 FBXL22Q6P050 247 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 HTR3DQ70Z44 454 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 LGI2Q8N0V4 545 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 MICALL1Q8N3F8 863 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 C12orf50Q8NA57 414 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 ACTL9Q8TC94 416 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 P3H4Q92791 437 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 USP13Q92995 863 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 GAS2L1Q99501 681 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 S1PR5Q9H228 398 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 TDP1Q9NUW8 608 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 PPARGC1AQ9UBK2 798 aaKnown RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 LSM7Q9UK45 103 aaKnown RBP18.13■□□□□ 0.49
UPF3A-206ENST00000480362 NEU3Q9UQ49 428 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 CCL26Q9Y258 94 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 HEY1Q9Y5J3 304 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 C2orf16Q68DN1 1984 aa18.13■□□□□ 0.49
UPF3A-206ENST00000480362 RANBP2P49792 3224 aaKnown RBP18.12■□□□□ 0.49
UPF3A-206ENST00000480362 DRGXA6NNA5 263 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 F5H5T6 163 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 SCAMP3O14828 347 aaKnown RBP18.12■□□□□ 0.49
UPF3A-206ENST00000480362 TBX10O75333 385 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 LATS1O95835 1130 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 CHRNA3P32297 505 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 KCNJ1P48048 391 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 PAFAH1B3Q15102 231 aaKnown RBP18.12■□□□□ 0.49
UPF3A-206ENST00000480362 ATAT1Q5SQI0 421 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 ADGRF1Q5T601 910 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 TTC27Q6P3X3 843 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 CCDC137Q6PK04 289 aaKnown RBP18.12■□□□□ 0.49
UPF3A-206ENST00000480362 TMCO3Q6UWJ1 677 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 Q6ZNB5 142 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 DDX42Q86XP3 938 aaKnown RBP eCLIP18.12■□□□□ 0.49
UPF3A-206ENST00000480362 MYRIPQ8NFW9 859 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 SH3RF2Q8TEC5 729 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 IGSF8Q969P0 613 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 DDX50Q9BQ39 737 aaKnown RBP18.12■□□□□ 0.49
UPF3A-206ENST00000480362 FRMD8P1Q9BZ68 369 aaPredicted RBP18.12■□□□□ 0.49
UPF3A-206ENST00000480362 ZYG11BQ9C0D3 744 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 CATSPERBQ9H7T0 1116 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 MPP6Q9NZW5 540 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 STOML2Q9UJZ1 356 aa18.12■□□□□ 0.49
UPF3A-206ENST00000480362 IGLV3-10A0A075B6K4 115 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 FGF10O15520 208 aaPredicted RBP18.11■□□□□ 0.49
UPF3A-206ENST00000480362 LIASO43766 372 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 PRAMEF12O95522 483 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 LTBRP36941 435 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 NR2C2P49116 596 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 IRAK1P51617 712 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 EIF3EP60228 445 aaKnown RBP18.11■□□□□ 0.49
UPF3A-206ENST00000480362 TUBB4BP68371 445 aa18.11■□□□□ 0.49
UPF3A-206ENST00000480362 MRPS25P82663 173 aaKnown RBP18.11■□□□□ 0.49
UPF3A-206ENST00000480362 GBE1Q04446 702 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms