RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ACAD10Q6JQN1 1059 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 CDHR3Q6ZTQ4 885 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 WDR75Q8IWA0 830 aaKnown RBP11.16□□□□□ -0.62
CHD6-208ENST00000480022 FAM71AQ8IYT1 594 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 FBXO36Q8NEA4 188 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 RMND5BQ96G75 393 aaPredicted RBP11.16□□□□□ -0.62
CHD6-208ENST00000480022 CTRCQ99895 268 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 EHD1Q9H4M9 534 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 IFT122Q9HBG6 1241 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 ERGIC3Q9Y282 383 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 KRBA1A5PL33 1030 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 PSTPIP1O43586 416 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 INHBAP08476 426 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 GAP43P17677 238 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 RPA1P27694 616 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 MRPS22P82650 360 aaKnown RBP11.16□□□□□ -0.62
CHD6-208ENST00000480022 AP3B2Q13367 1082 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 RHPN2Q8IUC4 686 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 RHOT1Q8IXI2 618 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 PPP1R14CQ8TAE6 165 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 HM13Q8TCT9 377 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 GRIN3AQ8TCU5 1115 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 PTCD2Q8WV60 388 aaKnown RBP11.16□□□□□ -0.62
CHD6-208ENST00000480022 KAT5Q92993 513 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 ATP2A3Q93084 1043 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 TAMM41Q96BW9 452 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 FERMT1Q9BQL6 677 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 TMEM117Q9H0C3 514 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 GJD2Q9UKL4 321 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 SMCHD1A6NHR9 2005 aa11.16□□□□□ -0.62
CHD6-208ENST00000480022 ARHGEF37A1IGU5 675 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 CFAP99D6REC4 459 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 SNNO75324 88 aaPredicted RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 ATE1O95260 518 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 FOSP01100 380 aaPredicted RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 NMT1P30419 496 aaKnown RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 TRIM16LQ309B1 348 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 ZNF792Q3KQV3 632 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 KRT80Q6KB66 452 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 DRICH1Q6PGQ1 229 aaPredicted RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 PCGF5Q86SE9 256 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 KATNAL2Q8IYT4 538 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 HELQQ8TDG4 1101 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 MRPL46Q9H2W6 279 aaKnown RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 STN1Q9H668 368 aaKnown RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 PNPLA3Q9NST1 481 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 DMAC2Q9NW81 257 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 STK39Q9UEW8 545 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 KLHL3Q9UH77 587 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 CNOT11Q9UKZ1 510 aaKnown RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 ARHGAP26Q9UNA1 814 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 ERVK-11Q9UQG0 969 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 PLLPQ9Y342 182 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 SOWAHBA6NEL2 793 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 GIPC1O14908 333 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 SLITRK3O94933 977 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 CAPNS1P04632 268 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 CD58P19256 250 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 JAK1P23458 1154 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 RCVRNP35243 200 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 BMXP51813 675 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 CTBSQ01459 385 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 STX3Q13277 289 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 MSS51Q4VC12 460 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 FNBP1LQ5T0N5 605 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 CPNE9Q8IYJ1 553 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 LILRA2Q8N149 483 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 MYO1HQ8N1T3 1032 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 TFB1MQ8WVM0 346 aaKnown RBP11.15□□□□□ -0.62
CHD6-208ENST00000480022 RMDN3Q96TC7 470 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 APOL6Q9BWW8 343 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 C20orf27Q9GZN8 174 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 XPNPEP1Q9NQW7 623 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 BCAP29Q9UHQ4 241 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 B3GNT3Q9Y2A9 372 aa11.15□□□□□ -0.62
CHD6-208ENST00000480022 LOC100653049A0A140TA62 436 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 SFI1A8K8P3 1242 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 J3QRK9 145 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 KPNA4O00629 521 aaPredicted RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 KRT34O76011 436 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 L1CAMP32004 1257 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 GJC1P36383 396 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 PEX3P56589 373 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 GAD2Q05329 585 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 FRMD7Q6ZUT3 714 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 DPP9Q86TI2 863 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 RDH13Q8NBN7 331 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 EXD1Q8NHP7 514 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 TRUB1Q8WWH5 349 aaKnown RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 SLC44A1Q8WWI5 657 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 SOCS4Q8WXH5 440 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 FBXL8Q96CD0 374 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 ERLEC1Q96DZ1 483 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 PKP2Q99959 881 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 PCDH9Q9HC56 1237 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 XAB2Q9HCS7 855 aaKnown RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 PXMP2Q9NR77 195 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms