RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 KLF16Q9BXK1 252 aaPredicted RBP11.57□□□□□ -0.56
APTX-223ENST00000479656 LMAN2LQ9H0V9 348 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 PRDM16Q9HAZ2 1276 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 ASAH2Q9NR71 780 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 SMPD4Q9NXE4 827 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 DTLQ9NZJ0 730 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 DNMT3BQ9UBC3 853 aaKnown RBP11.57□□□□□ -0.56
APTX-223ENST00000479656 SNX24Q9Y343 169 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 NEU2Q9Y3R4 380 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 SGK1O00141 431 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 KRT14P02533 472 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 ZSCAN5DPP0CG00 497 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 MBL2P11226 248 aaPredicted RBP11.57□□□□□ -0.56
APTX-223ENST00000479656 MCM3P25205 808 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 CCR2P41597 374 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 NRIP1P48552 1158 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 NR2C2P49116 596 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 AUHQ13825 339 aaKnown RBP11.57□□□□□ -0.56
APTX-223ENST00000479656 BRD3Q15059 726 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 PAFAH1B3Q15102 231 aaKnown RBP11.57□□□□□ -0.56
APTX-223ENST00000479656 FAM182AQ5T1J6 154 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 MANEALQ5VSG8 457 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 RAP1GAP2Q684P5 730 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 NUGGCQ68CJ6 796 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 TP53INP2Q8IXH6 220 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 ALLCQ8N6M5 410 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 RUBCNQ92622 972 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 WBP2Q969T9 261 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 TIFAQ96CG3 184 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 MPP6Q9NZW5 540 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 CHD7Q9P2D1 2997 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 VANGL2Q9ULK5 521 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 NFU1Q9UMS0 254 aa11.57□□□□□ -0.56
APTX-223ENST00000479656 MTCL1Q9Y4B5 1905 aaKnown RBP11.57□□□□□ -0.56
APTX-223ENST00000479656 CCDC195A0A1B0GUA6 201 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 MFSD11O43934 449 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 STC2O76061 302 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 IFNB1P01574 187 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 KLKB1P03952 638 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 IRF1P10914 325 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 CDC25CP30307 473 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 HARS2P49590 506 aaKnown RBP11.56□□□□□ -0.56
APTX-223ENST00000479656 VPS41P49754 854 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 CLCN6P51797 869 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 GDF10P55107 478 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 ZXDBP98169 803 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 NRG1Q02297 640 aaPredicted RBP11.56□□□□□ -0.56
APTX-223ENST00000479656 STXBP5Q5T5C0 1151 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 NADSYN1Q6IA69 706 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 SYDE1Q6ZW31 735 aaPredicted RBP11.56□□□□□ -0.56
APTX-223ENST00000479656 DENND1CQ8IV53 801 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 RSAD2Q8WXG1 361 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 SEC14L1Q92503 715 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 TBC1D31Q96DN5 1066 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 PKNOX2Q96KN3 472 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 PRMT1Q99873 361 aaKnown RBP11.56□□□□□ -0.56
APTX-223ENST00000479656 ARGLU1Q9NWB6 273 aaPredicted RBP11.56□□□□□ -0.56
APTX-223ENST00000479656 ASIC3Q9UHC3 531 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 NEU3Q9UQ49 428 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 CHD9Q3L8U1 2897 aa11.56□□□□□ -0.56
APTX-223ENST00000479656 RANBP2P49792 3224 aaKnown RBP11.55□□□□□ -0.56
APTX-223ENST00000479656 MYO7AQ13402 2215 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 CCDC151A5D8V7 595 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 ACSL4O60488 711 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 RHOP08100 348 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 HNRNPA1P09651 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
APTX-223ENST00000479656 RBL1P28749 1068 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 HOXA9P31269 272 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 RPL21P46778 160 aaKnown RBP11.55□□□□□ -0.56
APTX-223ENST00000479656 NRLP54845 237 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 DRG2P55039 364 aaKnown RBP11.55□□□□□ -0.56
APTX-223ENST00000479656 NTHL1P78549 312 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 SMAD3P84022 425 aaKnown RBP11.55□□□□□ -0.56
APTX-223ENST00000479656 PTK6Q13882 451 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 HLTFQ14527 1009 aaKnown RBP eCLIP11.55□□□□□ -0.56
APTX-223ENST00000479656 DUSP6Q16828 381 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 FBXL22Q6P050 247 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 LRRC31Q6UY01 552 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 PDZD4Q76G19 769 aaPredicted RBP11.55□□□□□ -0.56
APTX-223ENST00000479656 BZW1Q7L1Q6 419 aaKnown RBP11.55□□□□□ -0.56
APTX-223ENST00000479656 GRASPQ7Z6J2 395 aaPredicted RBP11.55□□□□□ -0.56
APTX-223ENST00000479656 ZNF683Q8IZ20 524 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 NPWQ8N729 165 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 C12orf76Q8N812 135 aaPredicted RBP11.55□□□□□ -0.56
APTX-223ENST00000479656 FAM71DQ8N9W8 422 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 IGSF8Q969P0 613 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 PLD4Q96BZ4 506 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 TCEAL4Q96EI5 215 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 ZFRQ96KR1 1074 aaKnown RBP11.55□□□□□ -0.56
APTX-223ENST00000479656 GCNAQ96QF7 691 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 SLC46A2Q9BY10 475 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 PRKD2Q9BZL6 878 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 IGFLR1Q9H665 355 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 CATSPERBQ9H7T0 1116 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 USP29Q9HBJ7 922 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 FAM114A2Q9NRY5 505 aa11.55□□□□□ -0.56
APTX-223ENST00000479656 DPP7Q9UHL4 492 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms