RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 RABEP1Q15276 862 aa18.08■□□□□ 0.48
HMGN1-212ENST00000479586 PLD4Q96BZ4 506 aa18.08■□□□□ 0.48
HMGN1-212ENST00000479586 DUSP16Q9BY84 665 aa18.08■□□□□ 0.48
HMGN1-212ENST00000479586 SUN2Q9UH99 717 aa18.08■□□□□ 0.48
HMGN1-212ENST00000479586 LRRC72A6NJI9 287 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 C10orf142B7Z368 130 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 TLR4O00206 839 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 SLC28A2O43868 658 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 RNASEH2AO75792 299 aaKnown RBP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 ASS1P00966 412 aaKnown RBP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 MPOP05164 745 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 ATP5BP06576 529 aaKnown RBP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 ACP1P24666 158 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 RXRGP48443 463 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 YWHAGP61981 247 aaKnown RBP eCLIP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 TRIP4Q15650 581 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 E2F4Q16254 413 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 PROX2Q3B8N5 592 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 ZACNQ401N2 412 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 PPP1R26Q5T8A7 1209 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 SPATS2Q86XZ4 545 aaKnown RBP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 LURAP1LQ8IV03 231 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 DHX40Q8IX18 779 aaKnown RBP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 OR2T34Q8NGX1 318 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 MYO19Q96H55 970 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 SERAC1Q96JX3 654 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 ZNF578Q96N58 590 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 NT5C1AQ9BXI3 368 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 TFIP11Q9UBB9 837 aaKnown RBP18.07■□□□□ 0.48
HMGN1-212ENST00000479586 SCML1Q9UN30 329 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 BOD1L1Q8NFC6 3051 aa18.07■□□□□ 0.48
HMGN1-212ENST00000479586 UBR5O95071 2799 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-212ENST00000479586 SIN3BO75182 1162 aa18.06■□□□□ 0.48
HMGN1-212ENST00000479586 RPN1P04843 607 aaKnown RBP18.06■□□□□ 0.48
HMGN1-212ENST00000479586 TRIM21P19474 475 aaKnown RBP18.06■□□□□ 0.48
HMGN1-212ENST00000479586 CD70P32970 193 aa18.06■□□□□ 0.48
HMGN1-212ENST00000479586 CST6Q15828 149 aa18.06■□□□□ 0.48
HMGN1-212ENST00000479586 TAF4BQ92750 862 aa18.06■□□□□ 0.48
HMGN1-212ENST00000479586 TMA16Q96EY4 203 aaKnown RBP18.06■□□□□ 0.48
HMGN1-212ENST00000479586 LRRC27Q9C0I9 530 aa18.06■□□□□ 0.48
HMGN1-212ENST00000479586 ERVMER34-1Q9H9K5 563 aa18.06■□□□□ 0.48
HMGN1-212ENST00000479586 CGNQ9P2M7 1197 aaKnown RBP18.06■□□□□ 0.48
HMGN1-212ENST00000479586 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.05■□□□□ 0.48
HMGN1-212ENST00000479586 SDC3O75056 442 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 HLA-DRAP01903 254 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 CD58P19256 250 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 POLR2EP19388 210 aaKnown RBP18.05■□□□□ 0.48
HMGN1-212ENST00000479586 CASP1P29466 404 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 PIK3CAP42336 1068 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 HARS2P49590 506 aaKnown RBP18.05■□□□□ 0.48
HMGN1-212ENST00000479586 CCR5P51681 352 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 GABREP78334 506 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 SV2AQ7L0J3 742 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 MMAAQ8IVH4 418 aaKnown RBP18.05■□□□□ 0.48
HMGN1-212ENST00000479586 ARHGAP18Q8N392 663 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 KCNE4Q8WWG9 221 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 NDRG1Q92597 394 aaKnown RBP18.05■□□□□ 0.48
HMGN1-212ENST00000479586 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.05■□□□□ 0.48
HMGN1-212ENST00000479586 APOBEC3GQ9HC16 384 aaKnown RBP18.05■□□□□ 0.48
HMGN1-212ENST00000479586 SLC39A2Q9NP94 309 aa18.05■□□□□ 0.48
HMGN1-212ENST00000479586 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.05■□□□□ 0.48
HMGN1-212ENST00000479586 TRIM38O00635 465 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 KLK10O43240 276 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 SIGLEC6O43699 453 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 RNASEH1O60930 286 aaKnown RBP18.04■□□□□ 0.48
HMGN1-212ENST00000479586 PPP2CBP62714 309 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 PPP2CAP67775 309 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 E2F1Q01094 437 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 VAC14Q08AM6 782 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 KNOP1Q1ED39 458 aaKnown RBP18.04■□□□□ 0.48
HMGN1-212ENST00000479586 HNRNPA1L2Q32P51 320 aaKnown RBP18.04■□□□□ 0.48
HMGN1-212ENST00000479586 SLC45A4Q5BKX6 768 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 CNNM4Q6P4Q7 775 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 BHLHA9Q7RTU4 235 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 OXR1Q8N573 874 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 AADATQ8N5Z0 425 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 DHX58Q96C10 678 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 MED8Q96G25 268 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 USP28Q96RU2 1077 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 OMDQ99983 421 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 SFMBT1Q9UHJ3 866 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 STOML2Q9UJZ1 356 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 FZD4Q9ULV1 537 aa18.04■□□□□ 0.48
HMGN1-212ENST00000479586 ADPRHP54922 357 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 ZNF445P59923 1031 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 SLC39A14Q15043 492 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 ZNF394Q53GI3 561 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 RAB41Q5JT25 222 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 ADGRF1Q5T601 910 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 C9orf64Q5T6V5 341 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 RFWD3Q6PCD5 774 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 UNC13DQ70J99 1090 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 PIGZQ86VD9 579 aa18.03■□□□□ 0.48
HMGN1-212ENST00000479586 SNRNP27Q8WVK2 155 aaKnown RBP18.03■□□□□ 0.48
HMGN1-212ENST00000479586 MSI1O43347 362 aaKnown RBP18.02■□□□□ 0.48
HMGN1-212ENST00000479586 TBL1XO60907 577 aa18.02■□□□□ 0.48
HMGN1-212ENST00000479586 DXOO77932 396 aaKnown RBP18.02■□□□□ 0.48
HMGN1-212ENST00000479586 SLC8A1P32418 973 aa18.02■□□□□ 0.48
HMGN1-212ENST00000479586 PSMD8P48556 350 aa18.02■□□□□ 0.48
HMGN1-212ENST00000479586 ST8SIA6P61647 398 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms