RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TSC1Q92574 1164 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 TMA16Q96EY4 203 aaKnown RBP16.77■□□□□ 0.28
DDX56-210ENST00000479440 LGMNQ99538 433 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 UBXN6Q9BZV1 441 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 APOBEC3GQ9HC16 384 aaKnown RBP16.77■□□□□ 0.28
DDX56-210ENST00000479440 STOML2Q9UJZ1 356 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 CUTAO60888 179 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 ZBED1O96006 694 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 NR3C1P04150 777 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 WNT1P04628 370 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 GLDCP23378 1020 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 CASP1P29466 404 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 ZNF394Q53GI3 561 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 PRAMEF14Q5SWL7 426 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 ADGRF1Q5T601 910 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 BROXQ5VW32 411 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 CEP135Q66GS9 1140 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 PIGZQ86VD9 579 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 SPACA3Q8IXA5 215 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 TTC39CQ8N584 583 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 RNF139Q8WU17 664 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 RFFLQ8WZ73 363 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 HEXIM2Q96MH2 286 aaKnown RBP16.76■□□□□ 0.27
DDX56-210ENST00000479440 FZD4Q9ULV1 537 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 CLCA2Q9UQC9 943 aa16.76■□□□□ 0.27
DDX56-210ENST00000479440 FLNBO75369 2602 aaKnown RBP16.76■□□□□ 0.27
DDX56-210ENST00000479440 GOLGA4Q13439 2230 aaKnown RBP16.76■□□□□ 0.27
DDX56-210ENST00000479440 A0A1W2PP55 124 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 POLR2DO15514 142 aaKnown RBP16.75■□□□□ 0.27
DDX56-210ENST00000479440 RNASEH2AO75792 299 aaKnown RBP16.75■□□□□ 0.27
DDX56-210ENST00000479440 ASLP04424 464 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 CKMT2P17540 419 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 CCR5P51681 352 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 VAMP7P51809 220 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 UCNP55089 124 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 TMPRSS3P57727 454 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 NXPH1P58417 271 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 RHDQ02161 417 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 CST6Q15828 149 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 MPP7Q5T2T1 576 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 ERICH1Q86X53 443 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 ZNF248Q8NDW4 579 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 OMDQ99983 421 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 IRX2Q9BZI1 471 aaPredicted RBP16.75■□□□□ 0.27
DDX56-210ENST00000479440 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 SERGEFQ9UGK8 458 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 ADAMTS1Q9UHI8 967 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 MTMR6Q9Y217 621 aa16.75■□□□□ 0.27
DDX56-210ENST00000479440 A0A1W2PR77 199 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 TYW5A2RUC4 315 aaKnown RBP16.74■□□□□ 0.27
DDX56-210ENST00000479440 PDXKO00764 312 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 MID1O15344 667 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 SIN3BO75182 1162 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 CD70P32970 193 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 TKTL1P51854 596 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 PCBP4P57723 403 aaKnown RBP16.74■□□□□ 0.27
DDX56-210ENST00000479440 CUL4BQ13620 913 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 NUMA1Q14980 2115 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 SFMBT2Q5VUG0 894 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 ARHGAP17Q68EM7 881 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 SHC4Q6S5L8 630 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 ZC3H3Q8IXZ2 948 aaKnown RBP16.74■□□□□ 0.27
DDX56-210ENST00000479440 DCBLD1Q8N8Z6 715 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 KIAA0895Q8NCT3 520 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 TAS1R2Q8TE23 839 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 WBP1Q96G27 269 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 SERAC1Q96JX3 654 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 ZNF396Q96N95 335 aaPredicted RBP16.74■□□□□ 0.27
DDX56-210ENST00000479440 ULBP1Q9BZM6 244 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 KCTD10Q9H3F6 313 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 ERVMER34-1Q9H9K5 563 aa16.74■□□□□ 0.27
DDX56-210ENST00000479440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
DDX56-210ENST00000479440 MAPK13O15264 365 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 IRAK2O43187 625 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 CALUO43852 315 aaPredicted RBP16.73■□□□□ 0.27
DDX56-210ENST00000479440 TBL1XO60907 577 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 YEATS4O95619 227 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 ACP1P24666 158 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 AFMP43652 599 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 RXRGP48443 463 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 SGSHP51688 502 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 INSM1Q01101 510 aaPredicted RBP16.73■□□□□ 0.27
DDX56-210ENST00000479440 KCNH2Q12809 1159 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 HNRNPA1L2Q32P51 320 aaKnown RBP16.73■□□□□ 0.27
DDX56-210ENST00000479440 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 PM20D1Q6GTS8 502 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 PCSK4Q6UW60 755 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 INTS8Q75QN2 995 aaKnown RBP16.73■□□□□ 0.27
DDX56-210ENST00000479440 MFN1Q8IWA4 741 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
DDX56-210ENST00000479440 CEP57L1Q8IYX8 460 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 ANKRD52Q8NB46 1076 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 KDM1BQ8NB78 822 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 FAXDC2Q96IV6 333 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
DDX56-210ENST00000479440 NEUROG2Q9H2A3 272 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 EBF2Q9HAK2 575 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 LRRC4Q9HBW1 653 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 FAM13BQ9NYF5 915 aa16.73■□□□□ 0.27
DDX56-210ENST00000479440 SFMBT1Q9UHJ3 866 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms