RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 ATP6V1B1P15313 513 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 VCLP18206 1134 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 PTPN7P35236 360 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 GRIA1P42261 906 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 ENTPD1P49961 510 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 HMGCS2P54868 508 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 YWHAEP62258 255 aaKnown RBP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 TUBA1BP68363 451 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 CRADDP78560 199 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 KRT81Q14533 505 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 ACAP1Q15027 740 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 NDUFA5Q16718 116 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 PPP1R2P3Q6NXS1 205 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 CASC4Q6P4E1 433 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 RAPH1Q70E73 1250 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 TUBA1AQ71U36 451 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 XYLT1Q86Y38 959 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 NIPA2Q8N8Q9 360 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 RNF149Q8NC42 400 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 NETO2Q8NC67 525 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 SLC26A7Q8TE54 656 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 ADPGKQ9BRR6 497 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 GPATCH1Q9BRR8 931 aaKnown RBP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 WWP1Q9H0M0 922 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 DHX33Q9H6R0 707 aaKnown RBP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 VTA1Q9NP79 307 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 PACSIN3Q9UKS6 424 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 ADGRA2Q96PE1 1338 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 C15orf38-AP3S2A0A0A6YYH1 394 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 TTC34A8MYJ7 566 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 S100BP04271 92 aaPredicted RBP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 ASPAP45381 313 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 STT3AP46977 705 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 RGS7P49802 495 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 CSE1LP55060 971 aaKnown RBP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 RPL10AP62906 217 aaKnown RBP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 TUBA4AP68366 448 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 CNTN2Q02246 1040 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 ANKDD1AQ495B1 522 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 ATG16L1Q676U5 607 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 ARPINQ7Z6K5 226 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 TMEM192Q8IY95 271 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 MPP5Q8N3R9 675 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 METTL25Q8N6Q8 603 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 UBR7Q8N806 425 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 KCNK4Q9NYG8 393 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 TAGLN3Q9UI15 199 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 AK5Q9Y6K8 562 aa11.36□□□□□ -0.59
LRRFIP1-211ENST00000478958 CAPN14A8MX76 684 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 ZMPSTE24O75844 475 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 TM7SF2O76062 418 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 STAMBPO95630 424 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 TRUB2O95900 331 aaKnown RBP11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 HMGCRP04035 888 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 PABPC1P11940 636 aaKnown RBP11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 PDGFRAP16234 1089 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 OSBPP22059 807 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 PPARGP37231 505 aaPredicted RBP11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 WASHC5Q12768 1159 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 KCNJ11Q14654 390 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 LPCAT4Q643R3 524 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 OR6B2Q6IFH4 312 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 STYK1Q6J9G0 422 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 DENND5BQ6ZUT9 1274 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 WDR49Q8IV35 697 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 GMLQ99445 158 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 PRPF18Q99633 342 aaKnown RBP11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 MRPL1Q9BYD6 325 aaKnown RBP11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 ZNF518BQ9C0D4 1074 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 ZDHHC7Q9NXF8 308 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 RRN3Q9NYV6 651 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 LOXHD1Q8IVV2 1947 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 INO80B-WBP1J3KQ70 363 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 B4GALT5O43286 388 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 ITM2AO43736 263 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 RFPL1O75677 317 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 F7P08709 466 aaPredicted RBP11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 ARL2P36404 184 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 DLG1Q12959 904 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 STX3Q13277 289 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 WDR45BQ5MNZ6 344 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 ZNF280CQ8ND82 737 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 TRPC4APQ8TEL6 797 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 PPP4R1Q8TF05 950 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 HEXIM2Q96MH2 286 aaKnown RBP11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 NLRP4Q96MN2 994 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 INO80BQ9C086 356 aaPredicted RBP11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 RSAD1Q9HA92 442 aa11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 HEMK1Q9Y5R4 338 aaPredicted RBP11.35□□□□□ -0.59
LRRFIP1-211ENST00000478958 ANKRD34BA5PLL1 514 aa11.34□□□□□ -0.59
LRRFIP1-211ENST00000478958 PRPSAP2O60256 369 aa11.34□□□□□ -0.59
LRRFIP1-211ENST00000478958 CXCL8P10145 99 aa11.34□□□□□ -0.59
LRRFIP1-211ENST00000478958 HOXD10P28358 340 aa11.34□□□□□ -0.59
LRRFIP1-211ENST00000478958 KPNA1P52294 538 aaPredicted RBP11.34□□□□□ -0.59
LRRFIP1-211ENST00000478958 BCAR1P56945 870 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms