RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 RNF139Q8WU17 664 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 DNAJC9Q8WXX5 260 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 SPATA13Q96N96 652 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 FCRL3Q96P31 734 aaPredicted RBP11.12□□□□□ -0.63
VPS52-217ENST00000478934 TLE6Q9H808 572 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.12□□□□□ -0.631e-8■■■■■ 28.6
VPS52-217ENST00000478934 SIRPGQ9P1W8 387 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 CPA4Q9UI42 421 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 IPPQ9Y573 584 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 NUP205Q92621 2012 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 PRR5-ARHGAP8B1AHC4 643 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 GOLGA8TH3BQL2 631 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 I3L4J1 428 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 FYNP06241 537 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 BPGMP07738 259 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 LINGO3P0C6S8 592 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 TPSB2P20231 275 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 GCKP35557 465 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 PGM1P36871 562 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 ARL4AP40617 200 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 CCNFP41002 786 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 CCNG1P51959 295 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 ARHGAP8P85298 464 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 PEX6Q13608 980 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 BLMHQ13867 455 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 PDE1CQ14123 709 aaPredicted RBP11.12□□□□□ -0.63
VPS52-217ENST00000478934 TPSAB1Q15661 275 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 FASTKD1Q53R41 847 aaKnown RBP11.12□□□□□ -0.63
VPS52-217ENST00000478934 WASHC2DQ5SRD0 308 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 N4BP2L1Q5TBK1 243 aaPredicted RBP11.12□□□□□ -0.63
VPS52-217ENST00000478934 CMC1Q7Z7K0 106 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 TTC39CQ8N584 583 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 TEX9Q8N6V9 391 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 EFCAB3Q8N7B9 438 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 POU5F2Q8N7G0 328 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 ENDOVQ8N8Q3 282 aaKnown RBP11.12□□□□□ -0.63
VPS52-217ENST00000478934 OR52K1Q8NGK4 314 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 PGBD4Q96DM1 585 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 DCLRE1BQ9H816 532 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 XPNPEP3Q9NQH7 507 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 UBP1Q9NZI7 540 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 LRRC42Q9Y546 428 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 TRIP12Q14669 1992 aaPredicted RBP11.12□□□□□ -0.63
VPS52-217ENST00000478934 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.11□□□□□ -0.63
VPS52-217ENST00000478934 YJEFN3A6XGL0 299 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 E7ENQ6 273 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 PTGESO14684 152 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 HUS1O60921 280 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 USP1O94782 785 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 TGDSO95455 350 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 PRKCGP05129 697 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 NR2C2P49116 596 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 TAF6P49848 677 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 GRB14Q14449 540 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 SLC25A52Q3SY17 297 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 VWA5B1Q5TIE3 1220 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 CLEC20AQ6ZU45 233 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 RSPH3Q86UC2 560 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS52-217ENST00000478934 ACVR1CQ8NER5 493 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 SLC7A14Q8TBB6 771 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 SCG3Q8WXD2 468 aaKnown RBP11.11□□□□□ -0.63
VPS52-217ENST00000478934 EDEM1Q92611 657 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 LPPQ93052 612 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 AGAP2Q99490 1192 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 GORASP1Q9BQQ3 440 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 SYT15Q9BQS2 421 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 PAAF1Q9BRP4 392 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 MED10Q9BTT4 135 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 THTPAQ9BU02 230 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 ABHD16BQ9H3Z7 469 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 DERAQ9Y315 318 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 ZSWIM8A7E2V4 1837 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
VPS52-217ENST00000478934 NVLO15381 856 aaKnown RBP11.11□□□□□ -0.63
VPS52-217ENST00000478934 PSMG1O95456 288 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 MYL3P08590 195 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 CRHR1P34998 444 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 TKTL1P51854 596 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 MXRA7P84157 204 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 DLG2Q15700 870 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 LGSNQ5TDP6 509 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 PACS1Q6VY07 963 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 USP50Q70EL3 339 aaPredicted RBP11.11□□□□□ -0.63
VPS52-217ENST00000478934 PID1Q7Z2X4 250 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 ZDHHC17Q8IUH5 632 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 KBTBD2Q8IY47 623 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 AGR3Q8TD06 166 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 DUSP16Q9BY84 665 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 OXCT2Q9BYC2 517 aaPredicted RBP11.11□□□□□ -0.63
VPS52-217ENST00000478934 CAB39LQ9H9S4 337 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 CRTAC1Q9NQ79 661 aa11.11□□□□□ -0.63
VPS52-217ENST00000478934 MYBPHLA2RUH7 354 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 SDR42E2A6NKP2 422 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 DNAJC6O75061 913 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 USP17L7P0C7H9 530 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 HOXD8P13378 290 aaPredicted RBP11.1□□□□□ -0.63
VPS52-217ENST00000478934 CD1EP15812 388 aa11.1□□□□□ -0.63
VPS52-217ENST00000478934 TPH1P17752 444 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms