RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ZYG11AQ6WRX3 759 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 KRT28Q7Z3Y7 464 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 SLC44A3Q8N4M1 653 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 STARD7Q9NQZ5 370 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 WWOXQ9NZC7 414 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 COLEC10Q9Y6Z7 277 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ZNF532Q9HCE3 1301 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ZSCAN5CA6NGD5 496 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 NUDT14O95848 222 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CYP4B1P13584 511 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CPB1P15086 417 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 TYK2P29597 1187 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 NMT1P30419 496 aaKnown RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 CCNHP51946 323 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 POU5F1BQ06416 359 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 EPHA10Q5JZY3 1008 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 EIF3MQ7L2H7 374 aaKnown RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 DHRSXQ8N5I4 330 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 UBXN10Q96LJ8 280 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 MTMR9Q96QG7 549 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 GPAMQ9HCL2 828 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 THAP1Q9NVV9 213 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 O00370 1275 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 IRS4O14654 1257 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 RAD51BO15315 384 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 STK17BO94768 372 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 POLBP06746 335 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 HOXB7P09629 217 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PIM1P11309 404 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 TSHRP16473 764 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 TEAD4Q15561 434 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 C5orf22Q49AR2 442 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ESCO2Q56NI9 601 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 OTUD3Q5T2D3 398 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 ADNP2Q6IQ32 1131 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 SLC9B2Q86UD5 537 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 BRSK2Q8IWQ3 736 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PNMA1Q8ND90 353 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ATL1Q8WXF7 558 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 MYDGFQ969H8 173 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PSKH2Q96QS6 385 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PLEKHA1Q9HB21 404 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 POPDC2Q9HBU9 364 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 MCCC2Q9HCC0 563 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 RABGEF1Q9UJ41 708 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 MCM8Q9UJA3 840 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PTPN22Q9Y2R2 807 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 AAR2Q9Y312 384 aaKnown RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 ANKRD33BA6NCL7 494 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 J3QR89 54 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 MEIS2O14770 477 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 SPTLC1O15269 473 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PDE8AO60658 829 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 APOL3O95236 402 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 FDFT1P37268 417 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 GPC3P51654 580 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CAPZA1P52907 286 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PKNOX1P55347 436 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 RUNX2Q13950 521 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 KRT31Q15323 416 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 MROH9Q5TGP6 573 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 OR6B2Q6IFH4 312 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 NAPEPLDQ6IQ20 393 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PRR5LQ6MZQ0 368 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ADGRG6Q86SQ4 1221 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 MTDHQ86UE4 582 aaKnown RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 KIF18BQ86Y91 864 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 MYO1HQ8N1T3 1032 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 LEMD2Q8NC56 503 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ALPK1Q96QP1 1244 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 TBC1D10AQ9BXI6 508 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ALG13Q9NP73 1137 aaKnown RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 PLA2G4CQ9UP65 541 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PLEKHA6Q9Y2H5 1048 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PCDHB6Q9Y5E3 794 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ZMYM4Q5VZL5 1548 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 FAM187AA6NFU0 413 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CCDC154A6NI56 674 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 L7N2F9 121 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MEN1O00255 615 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 BCAS1O75363 584 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 SLC16A8O95907 504 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 IFNA2P01563 188 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CYP2D6P10635 497 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 EPB42P16452 691 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ARFIP2P53365 341 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 VAMP2P63027 116 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ELAVL2Q12926 359 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 ACAP2Q15057 778 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 NR6A1Q15406 480 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TAF5Q15542 800 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 INO80DQ53TQ3 878 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 PCNX4Q63HM2 1172 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 IFNLR1Q8IU57 520 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 STK40Q8N2I9 435 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 C12orf45Q8N5I9 185 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 KBTBD8Q8NFY9 601 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 GRPEL2Q8TAA5 225 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CENPOQ9BU64 300 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ELL3Q9HB65 397 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms