RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 CCND1P24385 295 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 ACAT1P24752 427 aaKnown RBP6.26□□□□□ -1.41
SH3D19-207ENST00000478503 ELF1P32519 619 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 GMPRP36959 345 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 GRIA1P42261 906 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 SLC25A11Q02978 314 aaKnown RBP6.26□□□□□ -1.41
SH3D19-207ENST00000478503 MGAT5Q09328 741 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 PIN1Q13526 163 aaPredicted RBP6.26□□□□□ -1.41
SH3D19-207ENST00000478503 BMPR2Q13873 1038 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 PPP2R5DQ14738 602 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 LRRC23Q53EV4 343 aaPredicted RBP6.26□□□□□ -1.41
SH3D19-207ENST00000478503 RNASEH2BQ5TBB1 312 aaKnown RBP6.26□□□□□ -1.41
SH3D19-207ENST00000478503 CGB2Q6NT52 195 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 CENPUQ71F23 418 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 SPATA21Q7Z572 469 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 CCDC116Q8IYX3 515 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 FAM149B1Q96BN6 582 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 VCPIP1Q96JH7 1222 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 WDR83Q9BRX9 315 aaKnown RBP6.26□□□□□ -1.41
SH3D19-207ENST00000478503 RNF39Q9H2S5 420 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 NXF3Q9H4D5 531 aaKnown RBP6.26□□□□□ -1.41
SH3D19-207ENST00000478503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.26□□□□□ -1.41
SH3D19-207ENST00000478503 SLC17A7Q9P2U7 560 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 SLC17A6Q9P2U8 582 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 DKK3Q9UBP4 350 aa6.26□□□□□ -1.41
SH3D19-207ENST00000478503 USP15Q9Y4E8 981 aaPredicted RBP6.26□□□□□ -1.41
SH3D19-207ENST00000478503 CCDC195A0A1B0GUA6 201 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 C5orf60A6NFR6 353 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SIGLEC16A6NMB1 481 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 GOLGA8TH3BQL2 631 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 IGF2BP3O00425 579 aaKnown RBP eCLIP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ADCY6O43306 1168 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PRPSAP2O60256 369 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 UGT1A9O60656 530 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 EIF4BP23588 611 aaKnown RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 LMO2P25791 158 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 TARSP26639 723 aaKnown RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ELK3P41970 407 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 GPD2P43304 727 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ARHGAP1Q07960 439 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ANO4Q32M45 955 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 NOL9Q5SY16 702 aaKnown RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ZNF574Q6ZN55 896 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PIGWQ7Z7B1 504 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 UNC5BQ8IZJ1 945 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PYROXD2Q8N2H3 581 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ADAM32Q8TC27 787 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 FAF2Q96CS3 445 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ACAP3Q96P50 834 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SMC6Q96SB8 1091 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SLC13A1Q9BZW2 595 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ROPN1BQ9BZX4 212 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ROPN1Q9HAT0 212 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 UGT1A7Q9HAW7 530 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 UGT1A10Q9HAW8 530 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 UGT1A8Q9HAW9 530 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 NPHS2Q9NP85 383 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 OLA1Q9NTK5 396 aaKnown RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PTBP2Q9UKA9 531 aaKnown RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ITGB1BP2Q9UKP3 347 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 CNTN6Q9UQ52 1028 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 TIMM13Q9Y5L4 95 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 CLUHO75153 1309 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 CCDC78A2IDD5 438 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 FAM47DPA6NHR8 397 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 C3orf70A6NLC5 250 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 YBX3P16989 372 aaKnown RBP eCLIP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 TAC1P20366 129 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 RBL1P28749 1068 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 HOXD12P35452 270 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SOX11P35716 441 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 FOXK1P85037 733 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SMUG1Q53HV7 270 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PPP1R15BQ5SWA1 713 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 MFSD5Q6N075 450 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PRPF39Q86UA1 669 aaKnown RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 VSIG1Q86XK7 387 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ZBTB8BQ8NAP8 495 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 DNAJB8Q8NHS0 232 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 FAM172AQ8WUF8 416 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 MAML1Q92585 1016 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SGCDQ92629 289 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 P3H4Q92791 437 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 KLHL29Q96CT2 875 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 C2orf40Q9H1Z8 148 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 DHX35Q9H5Z1 703 aaKnown RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 ZNF395Q9H8N7 513 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 GJD2Q9UKL4 321 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 A0A0G2JND7 137 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PDHXO00330 501 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 MCF2LO15068 1137 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 CILPO75339 1184 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SUN1O94901 812 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 CBX6O95503 412 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PITX1P78337 314 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 BEX3Q00994 111 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 OLIG2Q13516 323 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 MMEL1Q495T6 779 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms