RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 SCML1Q9UN30 329 aa13.52□□□□□ -0.25
ABCF3-212ENST00000478288 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.52□□□□□ -0.25
ABCF3-212ENST00000478288 NYNRINQ9P2P1 1898 aaKnown RBP13.52□□□□□ -0.25
ABCF3-212ENST00000478288 PSMA7O14818 248 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 MSI1O43347 362 aaKnown RBP13.51□□□□□ -0.25
ABCF3-212ENST00000478288 HLA-EP13747 358 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 GRIA4P48058 902 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 BNC1Q01954 994 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 CETN1Q12798 172 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 STIM1Q13586 685 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 ARID5BQ14865 1188 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 HLA-BQ31612 363 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 TTC31Q49AM3 519 aaPredicted RBP13.51□□□□□ -0.25
ABCF3-212ENST00000478288 FAM133BQ5BKY9 247 aaKnown RBP13.51□□□□□ -0.25
ABCF3-212ENST00000478288 MBLAC2Q68D91 279 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 PMF1Q6P1K2 205 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 TMEM270Q6UE05 265 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 CCNI2Q6ZMN8 369 aaPredicted RBP13.51□□□□□ -0.25
ABCF3-212ENST00000478288 USP30Q70CQ3 517 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 BEND5Q7L4P6 421 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 ELOA2Q8IYF1 753 aaPredicted RBP13.51□□□□□ -0.25
ABCF3-212ENST00000478288 ENGASEQ8NFI3 743 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 UBA3Q8TBC4 463 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 CYB5D2Q8WUJ1 264 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 TFAP2BQ92481 460 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 SMARCE1Q969G3 411 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 DHTKD1Q96HY7 919 aaPredicted RBP13.51□□□□□ -0.25
ABCF3-212ENST00000478288 LMLNQ96KR4 655 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 TIGD1Q96MW7 591 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 NT5C1BQ96P26 610 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 CDC6Q99741 560 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 DDX50Q9BQ39 737 aaKnown RBP13.51□□□□□ -0.25
ABCF3-212ENST00000478288 BTBD1Q9H0C5 482 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 SGK2Q9HBY8 427 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 SUN2Q9UH99 717 aa13.51□□□□□ -0.25
ABCF3-212ENST00000478288 FNDC3AQ9Y2H6 1198 aaKnown RBP13.51□□□□□ -0.25
ABCF3-212ENST00000478288 ARID1BQ8NFD5 2236 aaPredicted RBP13.5□□□□□ -0.25
ABCF3-212ENST00000478288 ASXL3Q9C0F0 2248 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 TYW5A2RUC4 315 aaKnown RBP13.5□□□□□ -0.25
ABCF3-212ENST00000478288 SART1O43290 800 aaKnown RBP13.5□□□□□ -0.25
ABCF3-212ENST00000478288 ACSL4O60488 711 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 TSPAN3O60637 253 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 GABBR2O75899 941 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 SEMA4FO95754 770 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 LTFP02788 710 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 DNTTP04053 509 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 ASLP04424 464 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 LCP1P13796 627 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 ACSL1P33121 698 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 RPL34P49207 117 aaKnown RBP13.5□□□□□ -0.25
ABCF3-212ENST00000478288 SGSHP51688 502 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 RPS14P62263 151 aaKnown RBP13.5□□□□□ -0.25
ABCF3-212ENST00000478288 GCNT1Q02742 428 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 TEAD4Q15561 434 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 MEA1Q16626 185 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 ZNF776Q68DI1 518 aaPredicted RBP13.5□□□□□ -0.25
ABCF3-212ENST00000478288 CACUL1Q86Y37 369 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 HJURPQ8NCD3 748 aaPredicted RBP13.5□□□□□ -0.25
ABCF3-212ENST00000478288 FIBINQ8TAL6 211 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 TTC17Q96AE7 1141 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 SERPINB11Q96P15 392 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 TRIM62Q9BVG3 475 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 RSPH9Q9H1X1 276 aaPredicted RBP13.5□□□□□ -0.25
ABCF3-212ENST00000478288 C6orf106Q9H6K1 298 aaPredicted RBP13.5□□□□□ -0.25
ABCF3-212ENST00000478288 IL21RQ9HBE5 538 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 GDPD2Q9HCC8 539 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 PRSS16Q9NQE7 514 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 ADAMTS20P59510 1910 aa13.5□□□□□ -0.25
ABCF3-212ENST00000478288 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 COL5A1P20908 1838 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-212ENST00000478288 A0A1B0GVT2 93 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 TRIM49BA6NDI0 452 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 GOLGA6L4A6NEF3 574 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 M0QYV0 167 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 PAPSS1O43252 624 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-212ENST00000478288 TBL1XO60907 577 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 POLR2EP19388 210 aaKnown RBP13.49□□□□□ -0.25
ABCF3-212ENST00000478288 CD27P26842 260 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 CD70P32970 193 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 TBX4P57082 545 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 SFSWAPQ12872 951 aaKnown RBP13.49□□□□□ -0.25
ABCF3-212ENST00000478288 LRMPQ12912 555 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
ABCF3-212ENST00000478288 KIF19Q2TAC6 998 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 FAM124AQ86V42 546 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 MFN1Q8IWA4 741 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 LMO3Q8TAP4 145 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 SETD7Q8WTS6 366 aaKnown RBP13.49□□□□□ -0.25
ABCF3-212ENST00000478288 IGSF8Q969P0 613 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 BIRC7Q96CA5 298 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 MYO19Q96H55 970 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 ZSWIM1Q9BR11 485 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 TM9SF3Q9HD45 589 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 RALYQ9UKM9 306 aaKnown RBP13.49□□□□□ -0.25
ABCF3-212ENST00000478288 TLR6Q9Y2C9 796 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 PCDHB4Q9Y5E5 795 aa13.49□□□□□ -0.25
ABCF3-212ENST00000478288 C10orf142B7Z368 130 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 TAF4O00268 1085 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 PCDHGA12O60330 932 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms