RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	UBR5	O95071	2799 aa	Predicted RBP	11.04	□□□□□ -0.64
APTX-222	ENST00000478279	VPS37C	A5D8V6	355 aa	Predicted RBP	11.04	□□□□□ -0.64
APTX-222	ENST00000478279	C10orf142	B7Z368	130 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	TLR4	O00206	839 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	WNT9A	O14904	365 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	RNASEH1	O60930	286 aa	Known RBP	11.04	□□□□□ -0.64
APTX-222	ENST00000478279	WISP1	O95388	367 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	POLR2E	P19388	210 aa	Known RBP	11.04	□□□□□ -0.64
APTX-222	ENST00000478279	ACP1	P24666	158 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	HARS2	P49590	506 aa	Known RBP	11.04	□□□□□ -0.64
APTX-222	ENST00000478279	CCR5	P51681	352 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	NXPH1	P58417	271 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	E2F1	Q01094	437 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	KCNJ12	Q14500	433 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	E2F4	Q16254	413 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	ARHGAP40	Q5TG30	622 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	SPOPL	Q6IQ16	392 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	KANSL1	Q7Z3B3	1105 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.04	□□□□□ -0.64
APTX-222	ENST00000478279	GOLGA5	Q8TBA6	731 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	TMA16	Q96EY4	203 aa	Known RBP	11.04	□□□□□ -0.64
APTX-222	ENST00000478279	NAF1	Q96HR8	494 aa	Known RBP	11.04	□□□□□ -0.64
APTX-222	ENST00000478279	HIC2	Q96JB3	615 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	NEUROG2	Q9H2A3	272 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	CUEDC2	Q9H467	287 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	CPNE5	Q9HCH3	593 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	STOML2	Q9UJZ1	356 aa		11.04	□□□□□ -0.64
APTX-222	ENST00000478279	NBPF19	A0A087WUL8	3843 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279		A0A1W2PP55	124 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	PYCARD-AS1	I3L0S3	204 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	MID1	O15344	667 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	SIN3B	O75182	1162 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	CD2BP2	O95400	341 aa	Known RBP	11.03	□□□□□ -0.64
APTX-222	ENST00000478279	MT-CO3	P00414	261 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	YWHAG	P61981	247 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
APTX-222	ENST00000478279	DLG4	P78352	724 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	EHHADH	Q08426	723 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	LY6D	Q14210	128 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	SLC39A14	Q15043	492 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	CST6	Q15828	149 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	KNOP1	Q1ED39	458 aa	Known RBP	11.03	□□□□□ -0.64
APTX-222	ENST00000478279	PROX2	Q3B8N5	592 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	SLC45A4	Q5BKX6	768 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	ADGRF1	Q5T601	910 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.03	□□□□□ -0.64
APTX-222	ENST00000478279	FAM173B	Q6P4H8	233 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	KDM7A	Q6ZMT4	941 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	UNC13D	Q70J99	1090 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	SV2A	Q7L0J3	742 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	DHX40	Q8IX18	779 aa	Known RBP	11.03	□□□□□ -0.64
APTX-222	ENST00000478279	LSMEM2	Q8N112	164 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	TTC9	Q92623	222 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	SERAC1	Q96JX3	654 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	OMD	Q99983	421 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	C7orf25	Q9BPX7	421 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	UBXN6	Q9BZV1	441 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	DNAI2	Q9GZS0	605 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	MTG2	Q9H4K7	406 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	CYP3A43	Q9HB55	503 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	SERGEF	Q9UGK8	458 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	FZD4	Q9ULV1	537 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	TPX2	Q9ULW0	747 aa	Known RBP	11.03	□□□□□ -0.64
APTX-222	ENST00000478279	HBS1L	Q9Y450	684 aa	Known RBP	11.03	□□□□□ -0.64
APTX-222	ENST00000478279	BOD1L1	Q8NFC6	3051 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	FLNC	Q14315	2725 aa		11.03	□□□□□ -0.64
APTX-222	ENST00000478279	RNASEH2A	O75792	299 aa	Known RBP	11.02	□□□□□ -0.65
APTX-222	ENST00000478279	LATS1	O95835	1130 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	HLA-DRA	P01903	254 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	SLFN14	P0C7P3	912 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	CD70	P32970	193 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	ST8SIA6	P61647	398 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.02	□□□□□ -0.65
APTX-222	ENST00000478279	RAB41	Q5JT25	222 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	SPATS2	Q86XZ4	545 aa	Known RBP	11.02	□□□□□ -0.65
APTX-222	ENST00000478279	MFSD2A	Q8NA29	543 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	SNRNP27	Q8WVK2	155 aa	Known RBP	11.02	□□□□□ -0.65
APTX-222	ENST00000478279	MED8	Q96G25	268 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	MYO19	Q96H55	970 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	USP28	Q96RU2	1077 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	SLC39A2	Q9NP94	309 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	OLA1	Q9NTK5	396 aa	Known RBP	11.02	□□□□□ -0.65
APTX-222	ENST00000478279	DMAC2	Q9NW81	257 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	PCDHB1	Q9Y5F3	818 aa		11.02	□□□□□ -0.65
APTX-222	ENST00000478279	TLN1	Q9Y490	2541 aa	Known RBP	11.01	□□□□□ -0.65
APTX-222	ENST00000478279	TARSL2	A2RTX5	802 aa	Known RBP	11.01	□□□□□ -0.65
APTX-222	ENST00000478279	IKBKB	O14920	756 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	KLK10	O43240	276 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	SIGLEC6	O43699	453 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	SLC28A2	O43868	658 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	DXO	O77932	396 aa	Known RBP	11.01	□□□□□ -0.65
APTX-222	ENST00000478279	ZBED1	O96006	694 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	ASL	P04424	464 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	CD58	P19256	250 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	PDC	P20941	246 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	SLC8A1	P32418	973 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	PIK3CA	P42336	1068 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	ERVPABLB-1	P60509	514 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	VAC14	Q08AM6	782 aa		11.01	□□□□□ -0.65
APTX-222	ENST00000478279	ZNF211	Q13398	564 aa	Predicted RBP	11.01	□□□□□ -0.65
APTX-222	ENST00000478279	ARID5B	Q14865	1188 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms