RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CCDC177Q9NQR7 707 aaPredicted RBP3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 VPS45Q9NRW7 570 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 PPP4R1LQ9P1A2 415 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 DNAI1Q9UI46 699 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 BAG5Q9UL15 447 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 PSME2Q9UL46 239 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 USP18Q9UMW8 372 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 EXOC6BQ9Y2D4 811 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 ATP6V1DQ9Y5K8 247 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 ADAMTSL3P82987 1691 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 ARAP3Q8WWN8 1544 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 WDR19Q8NEZ3 1342 aa3.7□□□□□ -1.82
FNDC3B-209ENST00000478016 PCF11O94913 1555 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 FANCAO15360 1455 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 NEO1Q92859 1461 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 TARSL2A2RTX5 802 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 GOLGA6L4A6NEF3 574 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 TMEM232C9JQI7 657 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 E2F3O00716 465 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 IRAK2O43187 625 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 DAPK3O43293 454 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 SYNCRIPO60506 623 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 PQBP1O60828 265 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 KERAO60938 352 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 NIPSNAP2O75323 286 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 PTP4A3O75365 173 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 FSBPO95073 299 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 LARGE1O95461 756 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ITGB3P05106 788 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ABCB1P08183 1280 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 TMIGD3P0DMS9 266 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 PRKAR1AP10644 381 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 UBL4AP11441 157 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ALADP13716 330 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 HNRNPLP14866 589 aaKnown RBP eCLIP3.69□□□□□ -1.828e-13■■■■□ 26.5
FNDC3B-209ENST00000478016 PORP16435 677 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ZFXP17010 805 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 PRKACBP22694 351 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 CTNNA2P26232 953 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 AXLP30530 894 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 HNF1BP35680 557 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ARHGDIBP52566 201 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 VCPP55072 806 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 EIF4A1P60842 406 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ACTR1AP61163 376 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ASIC1P78348 528 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 HGFACQ04756 655 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 YWHAHQ04917 246 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 RNASELQ05823 741 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 PPARAQ07869 468 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ACTN3Q08043 901 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 CETN1Q12798 172 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 MTX1Q13505 466 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 HNRNPDQ14103 355 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ERV3-1Q14264 604 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 TBR1Q16650 682 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 PFKFB3Q16875 520 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 LRIT3Q3SXY7 679 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 PITRM1Q5JRX3 1037 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 SHEQ5VZ18 495 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 IZUMO3Q5VZ72 239 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 THOC7Q6I9Y2 204 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 NEK5Q6P3R8 708 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 TMEM154Q6P9G4 183 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 DCLRE1AQ6PJP8 1040 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 LRIG3Q6UXM1 1119 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 NCCRP1Q6ZVX7 275 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 CLEC14AQ86T13 490 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 CAND1Q86VP6 1230 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 CIR1Q86X95 450 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 FAM9CQ8IZT9 166 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ZNF565Q8N9K5 539 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 SHCBP1Q8NEM2 672 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 OR14K1Q8NGZ2 314 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 OR6S1Q8NH40 331 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 OR14C36Q8NHC7 312 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 SPPL3Q8TCT6 385 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 SH3RF3Q8TEJ3 882 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 PIGOQ8TEQ8 1089 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 GAB3Q8WWW8 586 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 HERVK_113Q902F9 699 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 RAPGEF5Q92565 580 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ARHGAP45Q92619 1136 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 SLC7A6OSQ96CW6 309 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 TMEM41AQ96HV5 264 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 ZBED3Q96IU2 234 aaPredicted RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 RUNDC3BQ96NL0 473 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 LRRC37BQ96QE4 947 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 CTAGE1Q96RT6 745 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 FNBP1Q96RU3 617 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 TBCBQ99426 244 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 KIFC3Q9BVG8 833 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 NFKBIZQ9BYH8 718 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 OSBPL6Q9BZF3 934 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 REXO4Q9GZR2 422 aaKnown RBP3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 TMEM60Q9H2L4 133 aa3.69□□□□□ -1.82
FNDC3B-209ENST00000478016 BHMT2Q9H2M3 363 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms