RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ARHGEF7Q14155 803 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 DLGAP5Q15398 846 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 PCID2Q5JVF3 399 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 TMEM31Q5JXX7 168 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 FCRLBQ6BAA4 426 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 PARS2Q7L3T8 475 aaKnown RBP5.44□□□□□ -1.54
VPS50-214ENST00000477935 ZNF804AQ7Z570 1209 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 KRT78Q8N1N4 520 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 DNAJB14Q8TBM8 379 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 PNISRQ8TF01 805 aaKnown RBP5.44□□□□□ -1.54
VPS50-214ENST00000477935 DPCDQ9BVM2 203 aaPredicted RBP5.44□□□□□ -1.54
VPS50-214ENST00000477935 FSD1LQ9BXM9 530 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 TRIM5Q9C035 493 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 CHST8Q9H2A9 424 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 DUOX1Q9NRD9 1551 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 MID2Q9UJV3 735 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 ITGB1BP2Q9UKP3 347 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 GABRQQ9UN88 632 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 ZNF804BA4D1E1 1349 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 AOX1Q06278 1338 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 CDH23Q9H251 3354 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 BTBD19C9JJ37 291 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 F8W8V4 182 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 RBMXL2O75526 392 aaKnown RBP5.43□□□□□ -1.54
VPS50-214ENST00000477935 JTBO76095 146 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 TJP3O95049 919 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 NPSP0C0P6 89 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 ZNF37AP17032 561 aaPredicted RBP5.43□□□□□ -1.54
VPS50-214ENST00000477935 ACVR2AP27037 513 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 BCAT1P54687 386 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 PRKCZQ05513 592 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 TNFAIP1Q13829 316 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 SLC29A2Q14542 456 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 NPY5RQ15761 445 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 CYP1B1Q16678 543 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 CCDC142Q17RM4 750 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 FCRL6Q6DN72 434 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 SUMO4Q6EEV6 95 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 TTLL5Q6EMB2 1281 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 DPY19L3Q6ZPD9 716 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 ERO1BQ86YB8 467 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 FANCBQ8NB91 859 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 PHKBQ93100 1093 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 RSPRY1Q96DX4 576 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 COA1Q9GZY4 146 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 DHX36Q9H2U1 1008 aaKnown RBP5.43□□□□□ -1.54
VPS50-214ENST00000477935 THEGQ9P2T0 379 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 ADAMTS5Q9UNA0 930 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 SNX13Q9Y5W8 968 aa5.43□□□□□ -1.54
VPS50-214ENST00000477935 COL2A1P02458 1487 aaPredicted RBP5.43□□□□□ -1.54
VPS50-214ENST00000477935 RAB27BO00194 218 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 CD3EAPO15446 510 aaKnown RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 RGS10O43665 173 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 PQBP1O60828 265 aaKnown RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 PRKCBP05771 671 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 DLDP09622 509 aaKnown RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 PRKAR1BP31321 381 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 CARSP49589 748 aaKnown RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 CPT1AP50416 773 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 ITGA8P53708 1063 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 MRPS21P82921 87 aaKnown RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 AAK1Q2M2I8 961 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 ZNF750Q32MQ0 723 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 UNC13DQ70J99 1090 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 ANKRD23Q86SG2 305 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 YAF2Q8IY57 180 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 HASPINQ8TF76 798 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 IPCEF1Q8WWN9 437 aaPredicted RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 REPS1Q96D71 796 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 PRR25Q96S07 402 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 STRBPQ96SI9 672 aaKnown RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 UNKQ9C0B0 810 aaKnown RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS50-214ENST00000477935 TTYH1Q9H313 450 aaPredicted RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 PANK3Q9H999 370 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 SH3BP4Q9P0V3 963 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 CORO2BQ9UQ03 480 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 FAM50BQ9Y247 325 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 DRG1Q9Y295 367 aaKnown RBP5.42□□□□□ -1.54
VPS50-214ENST00000477935 KNSTRNQ9Y448 316 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 SSC5DA1L4H1 1573 aa5.42□□□□□ -1.54
VPS50-214ENST00000477935 TAF1P21675 1872 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 WIPF3A6NGB9 483 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 RHPN2P1A8MT19 583 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 PIAS2O75928 621 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 MT-ND5P03915 603 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 BTF3P20290 206 aaKnown RBP5.41□□□□□ -1.54
VPS50-214ENST00000477935 IL1R2P27930 398 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 EPHA3P29320 983 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 UQCRC1P31930 480 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 CYP4F2P78329 520 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 E2F1Q01094 437 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 TFF2Q03403 129 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 PPATQ06203 517 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 PPIL2Q13356 520 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 VGLL4Q14135 290 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 TBC1D25Q3MII6 688 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 L1TD1Q5T7N2 865 aaKnown RBP5.41□□□□□ -1.54
VPS50-214ENST00000477935 NAPRTQ6XQN6 538 aa5.41□□□□□ -1.54
VPS50-214ENST00000477935 ABHD11Q8NFV4 315 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms