RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TUBB4AP04350 444 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TPOP07202 933 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ABCB1P08183 1280 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 GPR89BP0CG08 455 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 HNRNPCL4P0DMR1 293 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 GAAP10253 952 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CYP2C9P11712 490 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CKBP12277 381 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 RARGP13631 454 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PECAM1P16284 738 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ERCC2P18074 760 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 KELP23276 732 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PRKCHP24723 683 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 FPR2P25090 351 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ACVR2AP27037 513 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 NOS3P29474 1203 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CIITAP33076 1130 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 MSX2P35548 267 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 MTHFRP42898 656 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CPT1AP50416 773 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 MXI1P50539 228 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ZNF81P51508 661 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 LUMP51884 338 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 MRPL12P52815 198 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CDH15P55291 814 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 STX1BP61266 288 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 KCNJ10P78508 379 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PTSQ03393 145 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 RNASELQ05823 741 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 EXOSC9Q06265 439 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CETN1Q12798 172 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 LMAN2Q12907 356 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TARDBPQ13148 414 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CAMK2DQ13557 499 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ITGA7Q13683 1181 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ATP1A4Q13733 1029 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ARHGEF7Q14155 803 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 RCN2Q14257 317 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 NOLC1Q14978 699 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CLCA4Q14CN2 919 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 MEP1BQ16820 701 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 C19orf54Q5BKX5 351 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 KRBOX4Q5JUW0 171 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ZNF569Q5MCW4 686 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CBWD5Q5RIA9 395 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PLAG1Q6DJT9 500 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 DGAT2L7PQ6IED9 249 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TMEM132EQ6IEE7 984 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ETFRF1Q6IPR1 90 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 DENND1BQ6P3S1 775 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TRAT1Q6PIZ9 186 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 GAREM2Q75VX8 874 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ERN2Q76MJ5 926 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ADCK2Q7Z695 626 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TMEM200AQ86VY9 491 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 FAM129CQ86XR2 697 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TICAM1Q8IUC6 712 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 SIX6OS1Q8N1H7 587 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 GALNT4Q8N4A0 578 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 SLC15A4Q8N697 577 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PCSK9Q8NBP7 692 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 GALNT11Q8NCW6 608 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 OR6J1Q8NGC5 347 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 OR56A3Q8NH54 315 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 WDR48Q8TAF3 677 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CEP76Q8TAP6 659 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CCHCR1Q8TD31 782 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PLEKHO2Q8TD55 490 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 KCNE4Q8WWG9 221 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 NCSTNQ92542 709 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 SMARCE1Q969G3 411 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TUBGCP3Q96CW5 907 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ERO1AQ96HE7 468 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PGAM5Q96HS1 289 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 VPS50Q96JG6 964 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 Q96M66 194 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 FER1L6-AS2Q96M78 137 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 LENG8Q96PV6 779 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PPP1R10Q96QC0 940 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 NR1H4Q96RI1 486 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CTAGE1Q96RT6 745 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 FERMT1Q9BQL6 677 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 FDXACB1Q9BRP7 624 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TBCDQ9BTW9 1192 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 UTP14AQ9BVJ6 771 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 YIPF2Q9BWQ6 316 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CPEB1Q9BZB8 566 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 SLC25A18Q9H1K4 315 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ABCG8Q9H221 673 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 HSD3B7Q9H2F3 369 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 RXFP1Q9HBX9 757 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PDE11AQ9HCR9 933 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 XPNPEP3Q9NQH7 507 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 DDX4Q9NQI0 724 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 MBNL1Q9NR56 388 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 LIN7CQ9NUP9 197 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 ABCB8Q9NUT2 735 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TMEM140Q9NV12 185 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 KCMF1Q9P0J7 381 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms