RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 SLC2A11Q9BYW1 496 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 IMPG2Q9BZV3 1241 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 PABPC3Q9H361 631 aaKnown RBP12.47□□□□□ -0.41
HDAC6-219ENST00000476625 TSPAN16Q9UKR8 245 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 URB1O60287 2271 aaKnown RBP12.46□□□□□ -0.41
HDAC6-219ENST00000476625 TTC34A8MYJ7 566 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 PYCARD-AS1I3L0S3 204 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 CALUO43852 315 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-219ENST00000476625 PCDHGA12O60330 932 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 VAV1P15498 845 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 ACADVLP49748 655 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 BCAT1P54687 386 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 GALCP54803 685 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 PPP2CBP62714 309 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 PPP2CAP67775 309 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 SUZ12Q15022 739 aaKnown RBP12.46□□□□□ -0.41
HDAC6-219ENST00000476625 CBWD6Q4V339 395 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 FSCBQ5H9T9 825 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 CBWD3Q5JTY5 395 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 CBWD5Q5RIA9 395 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 HES3Q5TGS1 186 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 BSPRYQ5W0U4 402 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 ZNF776Q68DI1 518 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-219ENST00000476625 ARHGAP17Q68EM7 881 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 PM20D1Q6GTS8 502 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 MMAAQ8IVH4 418 aaKnown RBP12.46□□□□□ -0.41
HDAC6-219ENST00000476625 AHI1Q8N157 1196 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 CFAP52Q8N1V2 620 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDAC6-219ENST00000476625 ANKRD52Q8NB46 1076 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 TMEM174Q8WUU8 243 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 TMA16Q96EY4 203 aaKnown RBP12.46□□□□□ -0.41
HDAC6-219ENST00000476625 CDK5RAP1Q96SZ6 601 aaKnown RBP12.46□□□□□ -0.41
HDAC6-219ENST00000476625 ZSWIM1Q9BR11 485 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 NEUROG2Q9H2A3 272 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 TMEM8AQ9HCN3 771 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 FBXL12Q9NXK8 326 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 XPO7Q9UIA9 1087 aaKnown RBP12.46□□□□□ -0.41
HDAC6-219ENST00000476625 PLA2G4CQ9UP65 541 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 TRAF3IP3Q9Y228 551 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 CA5BQ9Y2D0 317 aa12.46□□□□□ -0.41
HDAC6-219ENST00000476625 COL27A1Q8IZC6 1860 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-219ENST00000476625 A0A1W2PPC4 97 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 A0A1W2PR77 199 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 LDOC1O95751 146 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-219ENST00000476625 DLDP09622 509 aaKnown RBP12.45□□□□□ -0.42
HDAC6-219ENST00000476625 ZSCAN22P10073 491 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-219ENST00000476625 CSKP41240 450 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 PSMD8P48556 350 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 HARS2P49590 506 aaKnown RBP12.45□□□□□ -0.42
HDAC6-219ENST00000476625 STK19P49842 368 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-219ENST00000476625 C21orf59P57076 290 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 RPS24P62847 133 aaKnown RBP12.45□□□□□ -0.42
HDAC6-219ENST00000476625 LRMPQ12912 555 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 ADGRF1Q5T601 910 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 PIK3R6Q5UE93 754 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 PCSK4Q6UW60 755 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 ARHGAP18Q8N392 663 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 AADATQ8N5Z0 425 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 SAP25Q8TEE9 199 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 WFIKKN2Q8TEU8 576 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 TFAP2BQ92481 460 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 ACE2Q9BYF1 805 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-219ENST00000476625 PCED1AQ9H1Q7 454 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 RSPH9Q9H1X1 276 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-219ENST00000476625 PRORYQ9H606 182 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 OSGEPQ9NPF4 335 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 AASDHPPTQ9NRN7 309 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 STOML2Q9UJZ1 356 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 ACACAQ13085 2346 aa12.45□□□□□ -0.42
HDAC6-219ENST00000476625 CABIN1Q9Y6J0 2220 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 XPO1O14980 1071 aaKnown RBP12.44□□□□□ -0.42
HDAC6-219ENST00000476625 VILLO15195 856 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 TIMM44O43615 452 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 SDC3O75056 442 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 RFPL3O75679 317 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 RNASEH2AO75792 299 aaKnown RBP12.44□□□□□ -0.42
HDAC6-219ENST00000476625 ITGAVP06756 1048 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 MYF5P13349 255 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 KRT10P13645 584 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 KRT13P13646 458 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 JUPP14923 745 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 CD19P15391 556 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 POLR2EP19388 210 aaKnown RBP12.44□□□□□ -0.42
HDAC6-219ENST00000476625 MXI1P50539 228 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 DAOAP59103 153 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 CST6Q15828 149 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 TTC31Q49AM3 519 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-219ENST00000476625 ZCWPW2Q504Y3 356 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 C9orf64Q5T6V5 341 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 KRT39Q6A163 491 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 INTS8Q75QN2 995 aaKnown RBP12.44□□□□□ -0.42
HDAC6-219ENST00000476625 CIR1Q86X95 450 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-219ENST00000476625 SPATS2Q86XZ4 545 aaKnown RBP12.44□□□□□ -0.42
HDAC6-219ENST00000476625 CARNMT1Q8N4J0 409 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 RNF139Q8WU17 664 aa12.44□□□□□ -0.42
HDAC6-219ENST00000476625 FCRL3Q96P31 734 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-219ENST00000476625 UBL7Q96S82 380 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-219ENST00000476625 ELF4Q99607 663 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms