RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 PRDM6Q9NQX0 595 aa15.66■□□□□ 0.1
MCF2L-224ENST00000475524 DUS2Q9NX74 493 aaKnown RBP15.66■□□□□ 0.1
MCF2L-224ENST00000475524 XPO7Q9UIA9 1087 aaKnown RBP15.66■□□□□ 0.1
MCF2L-224ENST00000475524 COL4A2P08572 1712 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 C19orf67A6NJJ6 358 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 WASH4PA8MWX3 477 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 E9PAM4 449 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 CES2O00748 559 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 DDX3YO15523 660 aaKnown RBP15.65■□□□□ 0.1
MCF2L-224ENST00000475524 LRIG2O94898 1065 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 CYBBP04839 570 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 PRLRP16471 622 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 KDELR1P24390 212 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 CDH6P55285 790 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 ZP2Q05996 745 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 SMTNL2Q2TAL5 461 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 EML3Q32P44 896 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 ODF2Q5BJF6 829 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 KCNT1Q5JUK3 1230 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 RAP1GAP2Q684P5 730 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 FBXL22Q6P050 247 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 CHST9Q7L1S5 443 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 ADGRG2Q8IZP9 1017 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 C17orf53Q8N3J3 647 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-224ENST00000475524 KCTD6Q8NC69 237 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 HSPH1Q92598 858 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 KRT35Q92764 455 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 IRF7Q92985 503 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 TBC1D31Q96DN5 1066 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 KCTD15Q96SI1 283 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-224ENST00000475524 KXD1Q9BQD3 176 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 SIK2Q9H0K1 926 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 CATSPERBQ9H7T0 1116 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 KCNK12Q9HB15 430 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 SPHK2Q9NRA0 654 aa15.65■□□□□ 0.1
MCF2L-224ENST00000475524 A0A1B0GVM2 712 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 LRRD1A4D1F6 860 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 TCAF2A6NFQ2 919 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 C3orf70A6NLC5 250 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-224ENST00000475524 HOXC11O43248 304 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-224ENST00000475524 ADH1CP00326 375 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 PENKP01210 267 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-224ENST00000475524 KRT1P04264 644 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 RHOQP17081 205 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 SLC6A4P31645 630 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 TPI1P60174 286 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 NR1H3Q13133 447 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 DPYSL3Q14195 570 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 KRT81Q14533 505 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 CA9Q16790 459 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 ZFYVE27Q5T4F4 411 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 ARTNQ5T4W7 220 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 LGI2Q8N0V4 545 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 CPA6Q8N4T0 437 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 ALG3Q92685 438 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 DNASE1L2Q92874 299 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 TMA16Q96EY4 203 aaKnown RBP15.64■□□□□ 0.09
MCF2L-224ENST00000475524 ASB2Q96Q27 587 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 NAPGQ99747 312 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-224ENST00000475524 SLC2A11Q9BYW1 496 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 PLA2G2FQ9BZM2 168 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 ZYG11BQ9C0D3 744 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 TMPRSS4Q9NRS4 437 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 GPATCH2LQ9NWQ4 482 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 STIM2Q9P246 746 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 NEU3Q9UQ49 428 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 WNT6Q9Y6F9 365 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 KIAA1549LQ6ZVL6 1849 aa15.64■□□□□ 0.09
MCF2L-224ENST00000475524 COL4A3Q01955 1670 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 CTAGE9A4FU28 777 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 ARNTLO00327 626 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 EEF2KO00418 725 aaKnown RBP15.63■□□□□ 0.09
MCF2L-224ENST00000475524 ZNF500O60304 480 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-224ENST00000475524 CLDN11O75508 207 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 BMP1P13497 986 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 TCP1P17987 556 aaKnown RBP15.63■□□□□ 0.09
MCF2L-224ENST00000475524 GJC1P36383 396 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 MARCKSL1P49006 195 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 CDH4P55283 916 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 OXCT1P55809 520 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 DPYSQ14117 519 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 ATP13A4Q4VNC1 1196 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 TFDP3Q5H9I0 405 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 PPP6R3Q5H9R7 873 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-224ENST00000475524 PAPD7Q5XG87 772 aaKnown RBP15.63■□□□□ 0.09
MCF2L-224ENST00000475524 RFX8Q6ZV50 586 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 PYROXD2Q8N2H3 581 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 LZTR1Q8N653 840 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 RAPGEF5Q92565 580 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 MSANTD3Q96H12 275 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 PRICKLE1Q96MT3 831 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-224ENST00000475524 RPRD1AQ96P16 312 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-224ENST00000475524 CSPG4P5Q96PW8 444 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 WDR24Q96S15 920 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 CWC15Q9P013 229 aaKnown RBP15.63■□□□□ 0.09
MCF2L-224ENST00000475524 LIMD1Q9UGP4 676 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 VANGL2Q9ULK5 521 aa15.63■□□□□ 0.09
MCF2L-224ENST00000475524 PACSIN2Q9UNF0 486 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-224ENST00000475524 CHD5Q8TDI0 1954 aa15.62■□□□□ 0.09
MCF2L-224ENST00000475524 FAM72CH0Y354 149 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms