RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 BIRC7Q96CA5 298 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 OSGEPQ9NPF4 335 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 ARMCX3Q9UH62 379 aaPredicted RBP25.91■■□□□ 1.74
TMEM54-205ENST00000475208 BTBD3Q9Y2F9 522 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 ANKRD6Q9Y2G4 727 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 ITPR1Q14643 2758 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 PTPRBP23467 1997 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 GOLGA6L7A0A1B0GV03 622 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 PIK3R2O00459 728 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 GABBR2O75899 941 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 FSBPO95073 299 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 POLR2EP19388 210 aaKnown RBP25.9■■□□□ 1.74
TMEM54-205ENST00000475208 GRIA4P48058 902 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 SLC11A2P49281 568 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 SUZ12Q15022 739 aaKnown RBP25.9■■□□□ 1.74
TMEM54-205ENST00000475208 COBLL1Q53SF7 1204 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 FAM133BQ5BKY9 247 aaKnown RBP25.9■■□□□ 1.74
TMEM54-205ENST00000475208 MPP7Q5T2T1 576 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 ZNF658Q5TYW1 1059 aaPredicted RBP25.9■■□□□ 1.74
TMEM54-205ENST00000475208 NUGGCQ68CJ6 796 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 ZNF776Q68DI1 518 aaPredicted RBP25.9■■□□□ 1.74
TMEM54-205ENST00000475208 TMEM270Q6UE05 265 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 LAYNQ6UX15 382 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 IRGQQ8WZA9 623 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 GOLGA1Q92805 767 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.9■■□□□ 1.74
TMEM54-205ENST00000475208 GPSM3Q9Y4H4 160 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 NBEAQ8NFP9 2946 aa25.9■■□□□ 1.74
TMEM54-205ENST00000475208 GOLGA8CPA6NN73 597 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 IRAK2O43187 625 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 PAEPP09466 180 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 SLC6A4P31645 630 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 PMF1Q6P1K2 205 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 C19orf48Q6RUI8 117 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 TMPRSS7Q7RTY8 843 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 UNC45BQ8IWX7 931 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 MDM1Q8TC05 714 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 SLC35F5Q8WV83 523 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 IRX2Q9BZI1 471 aaPredicted RBP25.89■■□□□ 1.74
TMEM54-205ENST00000475208 MTG2Q9H4K7 406 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 SGK2Q9HBY8 427 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 STIM2Q9P246 746 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 SUN2Q9UH99 717 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 KNL1Q8NG31 2342 aa25.89■■□□□ 1.74
TMEM54-205ENST00000475208 LAMA5O15230 3695 aa25.89■■□□□ 1.73
TMEM54-205ENST00000475208 TMEM131Q92545 1883 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 TRIM49BA6NDI0 452 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 M0QYV0 167 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 ACSL4O60488 711 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 DKK1O94907 266 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 LTFP02788 710 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 CD27P26842 260 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 TBX4P57082 545 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 MFN1Q8IWA4 741 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 ZNF557Q8N988 423 aaPredicted RBP25.88■■□□□ 1.73
TMEM54-205ENST00000475208 CLEC4CQ8WTT0 213 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 IGSF8Q969P0 613 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 PCDHB4Q9Y5E5 795 aa25.88■■□□□ 1.73
TMEM54-205ENST00000475208 ADAMTS20P59510 1910 aa25.87■■□□□ 1.73
TMEM54-205ENST00000475208 KCNK3O14649 394 aa25.87■■□□□ 1.73
TMEM54-205ENST00000475208 CCT8P50990 548 aa25.87■■□□□ 1.73
TMEM54-205ENST00000475208 LRRC63Q05C16 580 aa25.87■■□□□ 1.73
TMEM54-205ENST00000475208 NADSYN1Q6IA69 706 aa25.87■■□□□ 1.73
TMEM54-205ENST00000475208 HJURPQ8NCD3 748 aaPredicted RBP25.87■■□□□ 1.73
TMEM54-205ENST00000475208 PRICKLE1Q96MT3 831 aaPredicted RBP25.87■■□□□ 1.73
TMEM54-205ENST00000475208 NT5C1BQ96P26 610 aa25.87■■□□□ 1.73
TMEM54-205ENST00000475208 GSDMAQ96QA5 445 aa25.87■■□□□ 1.73
TMEM54-205ENST00000475208 ZSWIM1Q9BR11 485 aa25.87■■□□□ 1.73
TMEM54-205ENST00000475208 RSPH9Q9H1X1 276 aaPredicted RBP25.87■■□□□ 1.73
TMEM54-205ENST00000475208 CABIN1Q9Y6J0 2220 aa25.86■■□□□ 1.73
TMEM54-205ENST00000475208 BRD2P25440 801 aaKnown RBP25.86■■□□□ 1.73
TMEM54-205ENST00000475208 FMO5P49326 533 aa25.86■■□□□ 1.73
TMEM54-205ENST00000475208 CNGA2Q16280 664 aa25.86■■□□□ 1.73
TMEM54-205ENST00000475208 ADAT2Q7Z6V5 191 aaKnown RBP25.86■■□□□ 1.73
TMEM54-205ENST00000475208 FMR1NBQ8N0W7 255 aaPredicted RBP25.86■■□□□ 1.73
TMEM54-205ENST00000475208 GANCQ8TET4 914 aa25.86■■□□□ 1.73
TMEM54-205ENST00000475208 MYO19Q96H55 970 aa25.86■■□□□ 1.73
TMEM54-205ENST00000475208 LMLNQ96KR4 655 aa25.86■■□□□ 1.73
TMEM54-205ENST00000475208 ORAI3Q9BRQ5 295 aa25.86■■□□□ 1.73
TMEM54-205ENST00000475208 PABPC3Q9H361 631 aaKnown RBP25.86■■□□□ 1.73
TMEM54-205ENST00000475208 H0Y8X5 98 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 RNF225M0QZC1 329 aaPredicted RBP25.85■■□□□ 1.73
TMEM54-205ENST00000475208 CSKP41240 450 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 GRK6P43250 576 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 ST8SIA6P61647 398 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 KCNT1Q5JUK3 1230 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 KIAA0895LQ68EN5 471 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 PPM1KQ8N3J5 372 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 FIBINQ8TAL6 211 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 ERCC4Q92889 916 aaPredicted RBP25.85■■□□□ 1.73
TMEM54-205ENST00000475208 KAT5Q92993 513 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 AZIN2Q96A70 460 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 TTC17Q96AE7 1141 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 MYEOVQ96EZ4 313 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 HSFY1Q96LI6 401 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 MIS12Q9H081 205 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 INTS6Q9UL03 887 aaKnown RBP25.85■■□□□ 1.73
TMEM54-205ENST00000475208 NCKAP1Q9Y2A7 1128 aa25.85■■□□□ 1.73
TMEM54-205ENST00000475208 TYW5A2RUC4 315 aaKnown RBP25.84■■□□□ 1.73
TMEM54-205ENST00000475208 FAM47DPA6NHR8 397 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms