RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TAS1R3Q7RTX0 852 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CCDC105Q8IYK2 499 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PHTF2Q8N3S3 785 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 UBL4BQ8N7F7 174 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CCDC89Q8N998 374 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SPERTQ8NA61 448 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SIMC1Q8NDZ2 872 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 OR4M1Q8NGD0 313 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.22□□□□□ -1.73
USP16-205ENST00000474835 ZNF564Q8TBZ8 553 aaPredicted RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 MAPK15Q8TD08 544 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 BPIFB1Q8TDL5 484 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ARNTL2Q8WYA1 636 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 FAM89AQ96GI7 184 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ELMO2Q96JJ3 720 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 DHRS9Q9BPW9 319 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 EMILIN2Q9BXX0 1053 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 NIFKQ9BYG3 293 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 C12orf65Q9H3J6 166 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 KANSL2Q9H9L4 492 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SIAEQ9HAT2 523 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CD320Q9NPF0 282 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PCDHGC3Q9UN70 934 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SUGT1Q9Y2Z0 365 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PCDHB12Q9Y5F1 795 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PCDHGB3Q9Y5G1 929 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 RNF215Q9Y6U7 377 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TRIP12Q14669 1992 aaPredicted RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 ARHGAP10A1A4S6 786 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 RSPH10B2B2RC85 870 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 FAM86B1E9PN63 330 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PRPSAP2O60256 369 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CNOT3O75175 753 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 VNN1O95497 513 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 FAM86B2P0C5J1 330 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 FAM58BPP0C7Q3 252 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 RSPH10BP0C881 870 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 DLATP10515 647 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 RAG1P15918 1043 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CHRM3P20309 590 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PIK3CAP42336 1068 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CHRNDQ07001 517 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ZNF543Q08ER8 600 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TARDBPQ13148 414 aaKnown RBP eCLIP4.22□□□□□ -1.73
USP16-205ENST00000474835 FADDQ13158 208 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 MAP7Q14244 749 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SLC44A4Q53GD3 710 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CCDC92Q53HC0 331 aaPredicted RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 FGD3Q5JSP0 725 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 BBS12Q6ZW61 710 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SLC47A2Q86VL8 602 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ZSWIM2Q8NEG5 633 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 OR4M2Q8NGB6 313 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 GIPC3Q8TF64 312 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ATG4AQ8WYN0 398 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ZNF516Q92618 1163 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TOE1Q96GM8 510 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 TSG101Q99816 390 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SH2D3AQ9BRG2 576 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 IL22Q9GZX6 179 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ACOXLQ9NUZ1 547 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 THAP1Q9NVV9 213 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 RBAKQ9NYW8 714 aaPredicted RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 DSEQ9UL01 958 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 DNPEPQ9ULA0 475 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CDC14AQ9UNH5 594 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 NOSIPQ9Y314 301 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 CROCCQ5TZA2 2017 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 FAM170AA1A519 330 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 OR5K4A6NMS3 321 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 FXYD1O00168 92 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 CALUO43852 315 aaPredicted RBP4.21□□□□□ -1.73
USP16-205ENST00000474835 CCNT1O60563 726 aaKnown RBP4.21□□□□□ -1.73
USP16-205ENST00000474835 PLA2G6O60733 806 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 FARP2O94887 1054 aaPredicted RBP4.21□□□□□ -1.73
USP16-205ENST00000474835 MBL2P11226 248 aaPredicted RBP4.21□□□□□ -1.73
USP16-205ENST00000474835 MMP8P22894 467 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 JAK1P23458 1154 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 PSMA3P25788 255 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 GSTM2P28161 218 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 SLC7A1P30825 629 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 HPCAL1P37235 193 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 KCNC1P48547 511 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 YWHAZP63104 245 aaKnown RBP4.21□□□□□ -1.73
USP16-205ENST00000474835 PPIL2Q13356 520 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 TNK1Q13470 666 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 UBAP2LQ14157 1087 aaKnown RBP4.21□□□□□ -1.73
USP16-205ENST00000474835 CYP2A13Q16696 494 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 BRMS1LQ5PSV4 323 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 SLC9A4Q6AI14 798 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 ZBTB33Q86T24 672 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 VPS36Q86VN1 386 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 U2AF1L4Q8WU68 220 aaKnown RBP4.21□□□□□ -1.73
USP16-205ENST00000474835 AFG1LQ8WV93 481 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 PYDC1Q8WXC3 89 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 MTBPQ96DY7 904 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 SLC45A3Q96JT2 553 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 WDR18Q9BV38 432 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 SEZ6LQ9BYH1 1024 aa4.21□□□□□ -1.73
USP16-205ENST00000474835 IMPG2Q9BZV3 1241 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms