RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 EP300Q09472 2414 aaPredicted RBP16.58■□□□□ 0.24
ITGB1-210ENST00000474568 FAM186AA6NE01 2351 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 KCNU1A8MYU2 1149 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 F5H5T6 163 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 RETP07949 1114 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 HLA-EP13747 358 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 ATXN1P54253 815 aaKnown RBP16.57■□□□□ 0.24
ITGB1-210ENST00000474568 TPM4P67936 248 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 LMAN2Q12907 356 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 PLK5Q496M5 336 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 FNDC3BQ53EP0 1204 aaKnown RBP16.57■□□□□ 0.24
ITGB1-210ENST00000474568 MBLAC2Q68D91 279 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 TRNP1Q6NT89 227 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 CCDC117Q8IWD4 279 aaPredicted RBP16.57■□□□□ 0.24
ITGB1-210ENST00000474568 EMC1Q8N766 993 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 ZNF366Q8N895 744 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 WFIKKN2Q8TEU8 576 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 NPY6RQ99463 290 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 GABRG3Q99928 467 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 DUSP15Q9H1R2 295 aaPredicted RBP16.57■□□□□ 0.24
ITGB1-210ENST00000474568 ARRDC1-AS1Q9H2J1 176 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 PIGVQ9NUD9 493 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 STAP1Q9ULZ2 295 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 SNX10Q9Y5X0 201 aa16.57■□□□□ 0.24
ITGB1-210ENST00000474568 A0A1B0GTH6 734 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 H0Y626 953 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 ZBTB24O43167 697 aaPredicted RBP16.56■□□□□ 0.24
ITGB1-210ENST00000474568 SLC2A3P11169 496 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 NDUFV2P19404 249 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 PRKCHP24723 683 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 NSFP46459 744 aaKnown RBP16.56■□□□□ 0.24
ITGB1-210ENST00000474568 FANCCQ00597 558 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 DEUP1Q05D60 604 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 CDH18Q13634 790 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 STARD3Q14849 445 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 EIF4HQ15056 248 aaKnown RBP16.56■□□□□ 0.24
ITGB1-210ENST00000474568 ELF2Q15723 593 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 CLEC16AQ2KHT3 1053 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 FUT11Q495W5 492 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 FSCBQ5H9T9 825 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 MPP7Q5T2T1 576 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 KIAA1324Q6UXG2 1013 aaKnown RBP16.56■□□□□ 0.24
ITGB1-210ENST00000474568 SERPINA13PQ6UXR4 307 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 TRIM72Q6ZMU5 477 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 ADIPOR2Q86V24 386 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 CACUL1Q86Y37 369 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 AHI1Q8N157 1196 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 OLIG1Q8TAK6 271 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 BAP1Q92560 729 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 CFAP57Q96MR6 1250 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 AGPAT1Q99943 283 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 SIK2Q9H0K1 926 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 SMOC1Q9H4F8 434 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 TMPRSS4Q9NRS4 437 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 OTOGLQ3ZCN5 2332 aa16.56■□□□□ 0.24
ITGB1-210ENST00000474568 LRRC53A6NM62 1247 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 GOLGA6L19H0YKK7 550 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 MAP3K13O43283 966 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 PAGE1O75459 146 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 LUC7L3O95232 432 aaKnown RBP16.55■□□□□ 0.24
ITGB1-210ENST00000474568 ADCY5O95622 1261 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 EPHX1P07099 455 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 UNGP13051 313 aaPredicted RBP16.55■□□□□ 0.24
ITGB1-210ENST00000474568 FERP16591 822 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 POLR2EP19388 210 aaKnown RBP16.55■□□□□ 0.24
ITGB1-210ENST00000474568 MMP8P22894 467 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 SCNN1AP37088 669 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 IRAK1P51617 712 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 CENPCQ03188 943 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 SKOR2Q2VWA4 1001 aaPredicted RBP16.55■□□□□ 0.24
ITGB1-210ENST00000474568 RNF43Q68DV7 783 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 FBXL22Q6P050 247 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 SND1Q7KZF4 910 aaKnown RBP eCLIP16.55■□□□□ 0.24
ITGB1-210ENST00000474568 ARMCX6Q7L4S7 300 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 C14orf80Q86SX3 495 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 DEFB119Q8N690 84 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.55■□□□□ 0.242e-8■■■□□ 14.6
ITGB1-210ENST00000474568 JOSD2Q8TAC2 188 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 FIBINQ8TAL6 211 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 IGSF8Q969P0 613 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 SPACA7Q96KW9 195 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 RPRD1AQ96P16 312 aaPredicted RBP16.55■□□□□ 0.24
ITGB1-210ENST00000474568 PRMT1Q99873 361 aaKnown RBP16.55■□□□□ 0.24
ITGB1-210ENST00000474568 TKTL2Q9H0I9 626 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 WDCPQ9H6R7 721 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 CD248Q9HCU0 757 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 CD93Q9NPY3 652 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 ANLNQ9NQW6 1124 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 RRN3Q9NYV6 651 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 ADAM22Q9P0K1 906 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 TMEM59LQ9UK28 342 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 VANGL2Q9ULK5 521 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 CYP8B1Q9UNU6 501 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 HS3ST4Q9Y661 456 aa16.55■□□□□ 0.24
ITGB1-210ENST00000474568 GVINP1Q7Z2Y8 2422 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 TIMM44O43615 452 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 SYNCRIPO60506 623 aaKnown RBP16.54■□□□□ 0.24
ITGB1-210ENST00000474568 RHOBTB1O94844 696 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 EPN2O95208 641 aa16.54■□□□□ 0.24
ITGB1-210ENST00000474568 P2RY2P41231 377 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms