RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ITFG1Q8TB96 612 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 FAM71BQ8TC56 605 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 COG1Q8WTW3 980 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 EXOC4Q96A65 974 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 TMA16Q96EY4 203 aaKnown RBP10.68□□□□□ -0.7
COL12A1-206ENST00000474564 PEBP4Q96S96 227 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 HEMGNQ9BXL5 484 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 S1PR5Q9H228 398 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 ARGLU1Q9NWB6 273 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-206ENST00000474564 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.68□□□□□ -0.7
COL12A1-206ENST00000474564 VANGL2Q9ULK5 521 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 HS3ST4Q9Y661 456 aa10.68□□□□□ -0.7
COL12A1-206ENST00000474564 V9GYY5 206 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-206ENST00000474564 COL4A4P53420 1690 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 hCG_1818297A0A087WSY0 165 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 MCF2LO15068 1137 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 ZNF185O15231 689 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 TBX10O75333 385 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 CLDN11O75508 207 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 NEBLO76041 1014 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 STK10O94804 968 aaKnown RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 LRIG2O94898 1065 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 RHOQP17081 205 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 GOT1P17174 413 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 MX2P20592 715 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 KCNA5P22460 613 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 AMPD2Q01433 879 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 SMAD4Q13485 552 aaKnown RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 COL19A1Q14993 1142 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 PDK1Q15118 436 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 AAK1Q2M2I8 961 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 PREPLQ4J6C6 727 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 TXNRD3NBQ6F5E7 133 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 BBS12Q6ZW61 710 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 CPNE8Q86YQ8 564 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 CREG2Q8IUH2 290 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 LRRC49Q8IUZ0 686 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 NPAS3Q8IXF0 933 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 CPXM2Q8N436 756 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 TDRD5Q8NAT2 981 aaKnown RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 SMRP1Q8NCR6 262 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 BPIFB1Q8TDL5 484 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 GRK7Q8WTQ7 553 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 DDI1Q8WTU0 396 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 NSMCE1Q8WV22 266 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 USP13Q92995 863 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 MSLNLQ96KJ4 702 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 CSPG4P5Q96PW8 444 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 SLC22A12Q96S37 553 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 KCTD15Q96SI1 283 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 BRD8Q9H0E9 1235 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 UBE2ZQ9H832 354 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 CWC15Q9P013 229 aaKnown RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 CALCOCO1Q9P1Z2 691 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 AGO1Q9UL18 857 aaKnown RBP10.67□□□□□ -0.7
COL12A1-206ENST00000474564 HPCAL4Q9UM19 191 aa10.67□□□□□ -0.7
COL12A1-206ENST00000474564 H0Y626 953 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 APOC4-APOC2K7ER74 178 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 DYNC1I1O14576 645 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 PPP1R12AO14974 1030 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-206ENST00000474564 FANCGO15287 622 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 MOSPD3O75425 235 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 NFATC1O95644 943 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 ADH1CP00326 375 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 APOC2P02655 101 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 LAMP2P13473 410 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 KRT10P13645 584 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 ERCC2P18074 760 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 AMPD1P23109 780 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 OR1E1P30953 314 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 CHRNA3P32297 505 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 MAPKAPK2P49137 400 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 ARSEP51690 589 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 CDH4P55283 916 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 YBEYP58557 167 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-206ENST00000474564 DYNLT1P63172 113 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 C2orf54Q08AI8 447 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 PDGFRLQ15198 375 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 CCNG2Q16589 344 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 CA9Q16790 459 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 RAB6CQ53S08 254 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 FAM78AQ5JUQ0 283 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 MPP7Q5T2T1 576 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 STXBP5Q5T5C0 1151 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 C6orf118Q5T5N4 469 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 NUDT18Q6ZVK8 323 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 CHST9Q7L1S5 443 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 GSTA5Q7RTV2 222 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 MAATS1Q7Z4T9 603 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 ADAT2Q7Z6V5 191 aaKnown RBP10.66□□□□□ -0.7
COL12A1-206ENST00000474564 ZNF354CQ86Y25 554 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 PYROXD2Q8N2H3 581 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 DEPDC1BQ8WUY9 529 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 NXPE3Q969Y0 559 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 MAGOHBQ96A72 148 aaKnown RBP10.66□□□□□ -0.7
COL12A1-206ENST00000474564 MS4A14Q96JA4 679 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 ASB16Q96NS5 453 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 ADAM33Q9BZ11 813 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 RAB6CQ9H0N0 254 aa10.66□□□□□ -0.7
COL12A1-206ENST00000474564 TRPV4Q9HBA0 871 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms