RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SFPQP23246 707 aaKnown RBP eCLIP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 CYP3A7P24462 503 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 KLRK1P26718 216 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 CST5P28325 142 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 TAS2R50P59544 299 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 DMWDQ09019 674 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 RPS6KA2Q15349 733 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 TRIP6Q15654 476 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 ADCK5Q3MIX3 580 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 SLC9C1Q4G0N8 1177 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 TTC22Q5TAA0 569 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 ANKRD40Q6AI12 368 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 DGAT2L7PQ6IED9 249 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 ZNF425Q6IV72 752 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 SLC18B1Q6NT16 456 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 GGT6Q6P531 493 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 CRELD2Q6UXH1 353 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 KYAT3Q6YP21 454 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 YTHDF3Q7Z739 585 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 OR6Y1Q8NGX8 325 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 PRSS3P2Q8NHM4 247 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 STT3BQ8TCJ2 826 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 SLC2A12Q8TD20 617 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 OTUD7AQ8TE49 926 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 MORC4Q8TE76 937 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 ZFPM2Q8WW38 1151 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 THAP4Q8WY91 577 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 PIGKQ92643 395 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 MAP4K1Q92918 833 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 ZBTB9Q96C00 473 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 FCRL5Q96RD9 977 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 DDX23Q9BUQ8 820 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 BRD8Q9H0E9 1235 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 MAGEH1Q9H213 219 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 PABPC3Q9H361 631 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 ELAC1Q9H777 363 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 SEPSECSQ9HD40 501 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 IPO11Q9UI26 975 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 VPS4AQ9UN37 437 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 FAM90A18PA6NE21 464 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 FAM90A16PA6NEW6 464 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 FAM90A9PA6NNJ1 464 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 SLC38A8A6NNN8 435 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 CYSRT1A8MQ03 144 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 FAM90A5PA8MXJ8 464 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 E5RJQ4 531 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 F8W810 466 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 KCNAB3O43448 404 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 TFRCP02786 760 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 FAM90A15PP0C7V4 464 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 FAM90A14PP0C7W9 464 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 PRR35P0CG20 571 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 SERPINA4P29622 427 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 CHKAP35790 457 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 STAT6P42226 847 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 MMP13P45452 471 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 AGTR2P50052 363 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 ZNF84P51523 738 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 OAZ1P54368 228 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 ID2Q02363 134 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 DAZAP2Q15038 168 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 ZRSR2Q15696 482 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 ANXA2RQ3ZCQ2 193 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 KLHL22Q53GT1 634 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 CEP78Q5JTW2 689 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 ERAP2Q6P179 960 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 C16orf89Q6UX73 402 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 RBM44Q6ZP01 1051 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 ENDOVQ8N8Q3 282 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 SPATA3Q8NHX4 192 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 MPLKIPQ8TAP9 179 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 RUBCNQ92622 972 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 CELF1Q92879 486 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 PRR11Q96HE9 360 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 CLMNQ96JQ2 1002 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 PIGSQ96S52 555 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 ARPC5LQ9BPX5 153 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 SH2D3AQ9BRG2 576 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 TMEM79Q9BSE2 394 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 ELOVL1Q9BW60 279 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 TUBA8Q9NY65 449 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 SLC8A2Q9UPR5 921 aa3.7□□□□□ -1.82
ECHDC1-213ENST00000474240 SMIM35A0A1B0GVV1 85 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 KIF28PB7ZC32 967 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 M0QZQ0 153 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 PPP6R2O75170 966 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 CNTN5O94779 1100 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 TNNT1P13805 278 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 ATP5F1P24539 256 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 STAT1P42224 750 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 TRAPPC10P48553 1259 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 RPL15P61313 204 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 SSBP2P81877 361 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 CFHR1Q03591 330 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 MTA1Q13330 715 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 EFR3AQ14156 821 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 BTBD16Q32M84 506 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 MTX3Q5HYI7 312 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 PXDC1Q5TGL8 231 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 ANO1Q5XXA6 986 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms