RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 PTPRDP23468 1912 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 BPTFQ12830 3046 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 PLXND1Q9Y4D7 1925 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 SLC12A8A0AV02 714 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 TRABD2BA6NFA1 517 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 HHLA1C9JL84 531 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 TNFSF14O43557 240 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 CALUO43852 315 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 DXOO77932 396 aaKnown RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 FSBPO95073 299 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 HLA-DRAP01903 254 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 NR3C1P04150 777 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 KRT13P13646 458 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 HLA-EP13747 358 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 PRKCHP24723 683 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 HARS2P49590 506 aaKnown RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 CCT8P50990 548 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 YWHAGP61981 247 aaKnown RBP eCLIP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 INCA1Q0VD86 236 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 GPS2Q13227 327 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 KIF19Q2TAC6 998 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 TTC31Q49AM3 519 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 MPPE1Q53F39 396 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 ZNF394Q53GI3 561 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 PPP1R26Q5T8A7 1209 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 DBX2Q6ZNG2 339 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 SCD5Q86SK9 330 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 SLC9A9Q8IVB4 645 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 KRT222Q8N1A0 295 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 CPXM2Q8N436 756 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 ZNF276Q8N554 614 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 OR2T3Q8NH03 318 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 BAHD1Q8TBE0 780 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 SORCS1Q8WY21 1168 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 IGSF8Q969P0 613 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 SKA1Q96BD8 255 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 PIWIL1Q96J94 861 aaKnown RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 HEXIM2Q96MH2 286 aaKnown RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 TWNKQ96RR1 684 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 DUSP16Q9BY84 665 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 LHX5Q9H2C1 402 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 C6orf106Q9H6K1 298 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 MMRN2Q9H8L6 949 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 CYP3A43Q9HB55 503 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 TM9SF3Q9HD45 589 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 MARCH2Q9P0N8 246 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 USP25Q9UHP3 1055 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 NCKAP1Q9Y2A7 1128 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 ANKRD6Q9Y2G4 727 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-205ENST00000473344 SNX11Q9Y5W9 270 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 USP3Q9Y6I4 520 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 ADAMTS9Q9P2N4 1935 aa7.23□□□□□ -1.25
CKS1B-205ENST00000473344 A0A087WV48 116 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 FAM149AA5PLN7 773 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 FAM47DPA6NHR8 397 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 PDXKO00764 312 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 KCNK3O14649 394 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 CTIFO43310 598 aaKnown RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 DFNA5O60443 496 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 SEMA4FO95754 770 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 TUBB4AP04350 444 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 ATP5BP06576 529 aaKnown RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 CD46P15529 392 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 ACSL1P33121 698 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 HNF1BP35680 557 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 ABCG1P45844 678 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 GRIA4P48058 902 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 GCLMP48507 274 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 VAMP7P51809 220 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 BCAT1P54687 386 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 C21orf59P57076 290 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 IL9RQ01113 521 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 BNC1Q01954 994 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 ZBTB16Q05516 673 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 SFSWAPQ12872 951 aaKnown RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 STK4Q13043 487 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 CAMK2GQ13555 558 aaPredicted RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 SMAD1Q15797 465 aaKnown RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 FOXD4L6Q3SYB3 417 aaPredicted RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 C6orf118Q5T5N4 469 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 DHRS13Q6UX07 377 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 FOXD4L3Q6VB84 417 aaPredicted RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 INTS8Q75QN2 995 aaKnown RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 AHI1Q8N157 1196 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 TTC39CQ8N584 583 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 GANCQ8TET4 914 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 RNF139Q8WU17 664 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 CYB5D2Q8WUJ1 264 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 TMEM174Q8WUU8 243 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 GOLGA1Q92805 767 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 CCDC47Q96A33 483 aaKnown RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 PLD4Q96BZ4 506 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 BIRC7Q96CA5 298 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 MRGPRX2Q96LB1 330 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 ACE2Q9BYF1 805 aaPredicted RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 NIF3L1Q9GZT8 377 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 FBRSQ9HAH7 460 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 OSGEPQ9NPF4 335 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 OLA1Q9NTK5 396 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms