RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 SARM1Q6SZW1 724 aa20.35■□□□□ 0.85
APTX-218ENST00000473270 SIX6OS1Q8N1H7 587 aa20.35■□□□□ 0.85
APTX-218ENST00000473270 ZCCHC9Q8N567 271 aaKnown RBP20.35■□□□□ 0.85
APTX-218ENST00000473270 ANKRD52Q8NB46 1076 aa20.35■□□□□ 0.85
APTX-218ENST00000473270 SNX19Q92543 992 aa20.35■□□□□ 0.85
APTX-218ENST00000473270 ARID3AQ99856 593 aa20.35■□□□□ 0.85
APTX-218ENST00000473270 XPO4Q9C0E2 1151 aaKnown RBP20.35■□□□□ 0.85
APTX-218ENST00000473270 CD248Q9HCU0 757 aa20.35■□□□□ 0.85
APTX-218ENST00000473270 SIX2Q9NPC8 291 aa20.35■□□□□ 0.85
APTX-218ENST00000473270 FAM207AQ9NSI2 230 aaPredicted RBP20.35■□□□□ 0.85
APTX-218ENST00000473270 USP36Q9P275 1121 aaKnown RBP20.35■□□□□ 0.85
APTX-218ENST00000473270 RALYQ9UKM9 306 aaKnown RBP20.35■□□□□ 0.85
APTX-218ENST00000473270 PCDHB4Q9Y5E5 795 aa20.35■□□□□ 0.85
APTX-218ENST00000473270 CEP192Q8TEP8 1941 aa20.35■□□□□ 0.85
APTX-218ENST00000473270 MATKP42679 507 aa20.34■□□□□ 0.85
APTX-218ENST00000473270 BCAT1P54687 386 aa20.34■□□□□ 0.85
APTX-218ENST00000473270 SUZ12Q15022 739 aaKnown RBP20.34■□□□□ 0.85
APTX-218ENST00000473270 ARHGAP44Q17R89 818 aa20.34■□□□□ 0.85
APTX-218ENST00000473270 PIGZQ86VD9 579 aa20.34■□□□□ 0.85
APTX-218ENST00000473270 DNASE2BQ8WZ79 361 aa20.34■□□□□ 0.85
APTX-218ENST00000473270 TRIM5Q9C035 493 aa20.34■□□□□ 0.85
APTX-218ENST00000473270 MKRN2Q9H000 416 aaKnown RBP20.34■□□□□ 0.85
APTX-218ENST00000473270 UCHL3P15374 230 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 CD19P15391 556 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 KLK7P49862 253 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 RAPGEF1Q13905 1077 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 TEAD4Q15561 434 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 SGO2Q562F6 1265 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 ARHGAP17Q68EM7 881 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 GJB7Q6PEY0 223 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 CACUL1Q86Y37 369 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 FMNL3Q8IVF7 1028 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 CCDC117Q8IWD4 279 aaPredicted RBP20.33■□□□□ 0.85
APTX-218ENST00000473270 SLC4A11Q8NBS3 891 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 WFIKKN2Q8TEU8 576 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 GOLGA1Q92805 767 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 KAT5Q92993 513 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 KREMEN1Q96MU8 473 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 TMEM121BQ9BXQ6 578 aaPredicted RBP20.33■□□□□ 0.85
APTX-218ENST00000473270 PCED1AQ9H1Q7 454 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 GAREM1Q9H706 876 aa20.33■□□□□ 0.85
APTX-218ENST00000473270 HBS1LQ9Y450 684 aaKnown RBP20.33■□□□□ 0.85
APTX-218ENST00000473270 METTL12A8MUP2 240 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 ATP5BP06576 529 aaKnown RBP20.32■□□□□ 0.84
APTX-218ENST00000473270 FTH1P19P0C7X4 201 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 KRT5P13647 590 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 RAD23BP54727 409 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 POLR2FP61218 127 aaKnown RBP20.32■□□□□ 0.84
APTX-218ENST00000473270 APBA1Q02410 837 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 BST2Q10589 180 aaKnown RBP20.32■□□□□ 0.84
APTX-218ENST00000473270 GOLGA7BQ2TAP0 167 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 TMEM270Q6UE05 265 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 RAB44Q7Z6P3 723 aaPredicted RBP20.32■□□□□ 0.84
APTX-218ENST00000473270 FAM124AQ86V42 546 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 ZNF557Q8N988 423 aaPredicted RBP20.32■□□□□ 0.84
APTX-218ENST00000473270 TMA16Q96EY4 203 aaKnown RBP20.32■□□□□ 0.84
APTX-218ENST00000473270 PIWIL1Q96J94 861 aaKnown RBP20.32■□□□□ 0.84
APTX-218ENST00000473270 CAMK1GQ96NX5 476 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 ULBP1Q9BZM6 244 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 FBRSQ9HAH7 460 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 CD93Q9NPY3 652 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 FHOD1Q9Y613 1164 aa20.32■□□□□ 0.84
APTX-218ENST00000473270 TYW5A2RUC4 315 aaKnown RBP20.31■□□□□ 0.84
APTX-218ENST00000473270 XPO1O14980 1071 aaKnown RBP20.31■□□□□ 0.84
APTX-218ENST00000473270 TSPAN3O60637 253 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 USP8P40818 1118 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 AFF3P51826 1226 aaKnown RBP20.31■□□□□ 0.84
APTX-218ENST00000473270 FAM193AP78312 1265 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 SFSWAPQ12872 951 aaKnown RBP20.31■□□□□ 0.84
APTX-218ENST00000473270 ENPP2Q13822 863 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 RAB41Q5JT25 222 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 DPY19L2P1Q6NXN4 242 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 UBR7Q8N806 425 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 OR2T3Q8NH03 318 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 IQCDQ96DY2 449 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 SPAG5Q96R06 1193 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 CDC6Q99741 560 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 STK33Q9BYT3 514 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 GANQ9H2C0 597 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 LHX5Q9H2C1 402 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 ABCC13Q9NSE7 274 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 EIF2B4Q9UI10 523 aaKnown RBP20.31■□□□□ 0.84
APTX-218ENST00000473270 KIAA1257Q9ULG3 409 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 LHX6Q9UPM6 363 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 ADAMTS9Q9P2N4 1935 aa20.31■□□□□ 0.84
APTX-218ENST00000473270 FAM208BQ5VWN6 2430 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 DNTTP04053 509 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 PAEPP09466 180 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 ZNF883P0CG24 379 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 DRAP1Q14919 205 aaPredicted RBP20.3■□□□□ 0.84
APTX-218ENST00000473270 TTC31Q49AM3 519 aaPredicted RBP20.3■□□□□ 0.84
APTX-218ENST00000473270 PM20D1Q6GTS8 502 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 ADAT2Q7Z6V5 191 aaKnown RBP20.3■□□□□ 0.84
APTX-218ENST00000473270 AHI1Q8N157 1196 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 RBBP8NLQ8NC74 664 aaPredicted RBP20.3■□□□□ 0.84
APTX-218ENST00000473270 ADAMTS14Q8WXS8 1223 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 SHC3Q92529 594 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 TM7SF3Q9NS93 570 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 TSPAN16Q9UKR8 245 aa20.3■□□□□ 0.84
APTX-218ENST00000473270 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms