RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 RNF40O75150 1001 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 ENDOD1O94919 500 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 KAT7O95251 611 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 LATS1O95835 1130 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 FTLP02792 175 aaPredicted RBP13.6□□□□□ -0.23
TPM3-216ENST00000473036 SERPING1P05155 500 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 ADRB1P08588 477 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 FAM228BP0C875 321 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 GZMAP12544 262 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 TDGF1P13385 188 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 DRD1P21728 446 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 TGM1P22735 817 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 CHKAP35790 457 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 GGCXP38435 758 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 EIF2DP41214 584 aaKnown RBP13.6□□□□□ -0.23
TPM3-216ENST00000473036 CXCR3P49682 368 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 SULT1E1P49888 294 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 IRAK1P51617 712 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 SNX16P57768 344 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 SATB1Q01826 763 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 GRSF1Q12849 480 aaKnown RBP eCLIP13.6□□□□□ -0.23
TPM3-216ENST00000473036 NUGGCQ68CJ6 796 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 TMEM215Q68D42 235 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 LAIR1Q6GTX8 287 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 TMC6Q7Z403 805 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 C14orf80Q86SX3 495 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 UNC45BQ8IWX7 931 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 LMLNQ96KR4 655 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 PNKPQ96T60 521 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 CHP1Q99653 195 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 TRIM62Q9BVG3 475 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 ISCUQ9H1K1 167 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 DNAJC17Q9NVM6 304 aaKnown RBP13.6□□□□□ -0.23
TPM3-216ENST00000473036 WDR35Q9P2L0 1181 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 CHD6Q8TD26 2715 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 ZFHX4Q86UP3 3567 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 SIGLEC16A6NMB1 481 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 NRDCO43847 1150 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 CALB1P05937 261 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 RETP07949 1114 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 KRT3P12035 628 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 HNRNPLP14866 589 aaKnown RBP eCLIP13.59□□□□□ -0.23
TPM3-216ENST00000473036 CNR2P34972 360 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 KIR2DL1P43626 348 aaPredicted RBP13.59□□□□□ -0.23
TPM3-216ENST00000473036 CCR3P51677 355 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 SEC13P55735 322 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 GSDMDP57764 484 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 RPS24P62847 133 aaKnown RBP13.59□□□□□ -0.23
TPM3-216ENST00000473036 ZNF252P-AS1Q0IIN9 211 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 MAMLD1Q13495 774 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 GEN1Q17RS7 908 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 MS4A13Q5J8X5 152 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 DGKKQ5KSL6 1271 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 RAP1GAP2Q684P5 730 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 PLEKHA7Q6IQ23 1121 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 TSSK4Q6SA08 328 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 ZNF683Q8IZ20 524 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 CFAP52Q8N1V2 620 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 TC2NQ8N9U0 490 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 MSANTD4Q8NCY6 345 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 CENPIQ92674 756 aaPredicted RBP13.59□□□□□ -0.23
TPM3-216ENST00000473036 ARHGEF4Q9NR80 690 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 ABHD10Q9NUJ1 306 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.59□□□□□ -0.23
TPM3-216ENST00000473036 ARHGEF38Q9NXL2 777 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 USP18Q9UMW8 372 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 HS3ST4Q9Y661 456 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 DOCK4Q8N1I0 1966 aa13.59□□□□□ -0.23
TPM3-216ENST00000473036 EML5Q05BV3 1969 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 K7ESF4 209 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 SLC30A4O14863 429 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 RTN2O75298 545 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 PAGE1O75459 146 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 KRT37O76014 449 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 PDGFRAP16234 1089 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 TACR2P21452 398 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 EIF4A3P38919 411 aaKnown RBP13.58□□□□□ -0.24
TPM3-216ENST00000473036 HDAC4P56524 1084 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 ATP11AP98196 1134 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 AMPD2Q01433 879 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 DMWDQ09019 674 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 LRRC32Q14392 662 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 TDRD12Q587J7 1177 aaKnown RBP13.58□□□□□ -0.24
TPM3-216ENST00000473036 CIR1Q86X95 450 aaPredicted RBP13.58□□□□□ -0.24
TPM3-216ENST00000473036 CNGA4Q8IV77 575 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 ARFGAP1Q8N6T3 406 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 TERB1Q8NA31 727 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 OR8K1Q8NGG5 319 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 RPLP0P6Q8NHW5 317 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 USP33Q8TEY7 942 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 DDI1Q8WTU0 396 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 IGSF8Q969P0 613 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 ARHGEF26Q96DR7 871 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 VCPIP1Q96JH7 1222 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 BTN2A3PQ96KV6 586 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 MCEEQ96PE7 176 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 TKTL2Q9H0I9 626 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 RRN3Q9NYV6 651 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 DEC1Q9P2X7 70 aa13.58□□□□□ -0.24
TPM3-216ENST00000473036 MUC22E2RYF6 1773 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms