RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ROBO1Q9Y6N7 1651 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 PLCH2O75038 1416 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CCDC187A0A096LP49 1063 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 H0Y626 953 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 QSOX1O00391 747 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 PER2O15055 1255 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 FMO6PO60774 539 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CHGBP05060 677 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 UQCRC1P31930 480 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ARL3P36405 182 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ADCY7P51828 1080 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 DGKEP52429 567 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CDH8P55286 799 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 RPL15P61313 204 aaKnown RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 PRKCQQ04759 706 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 COASYQ13057 564 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 NRN1LQ496H8 165 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 FAM47AQ5JRC9 791 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CBWD5Q5RIA9 395 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ATXN7L2Q5T6C5 722 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 GARNL3Q5VVW2 1013 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 FAM160B1Q5W0V3 765 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 KRT40Q6A162 431 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ADALQ6DHV7 355 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ANO7Q6IWH7 933 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 TAPT1Q6NXT6 567 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 SUPT20HQ8NEM7 779 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 MYLIPQ8WY64 445 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 GCDHQ92947 438 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 JAKMIP2Q96AA8 810 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ZDHHC12Q96GR4 267 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 FAM227BQ96M60 508 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 AK8Q96MA6 479 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CMTM3Q96MX0 182 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 HIST1H2AAQ96QV6 131 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 TRIB1Q96RU8 372 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 PAFAH2Q99487 392 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 C11orf84Q9BUA3 381 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 USP29Q9HBJ7 922 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 VEZTQ9HBM0 779 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 DNAJB11Q9UBS4 358 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 NDRG4Q9ULP0 352 aaKnown RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 NENFQ9UMX5 172 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 RABL2BQ9UNT1 228 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 SLC12A4Q9UP95 1085 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ZFP37Q9Y6Q3 630 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 JCADQ9P266 1359 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ADGRF5Q8IZF2 1346 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 COL16A1Q07092 1604 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 PLXNC1O60486 1568 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 UBE2QL1A1L167 161 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 FRMD3A2A2Y4 597 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 OR2W5A6NFC9 320 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 WIPF3A6NGB9 483 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 LIPT2A6NK58 231 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 H3BQ06 376 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 CTDSP2O14595 271 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CTIFO43310 598 aaKnown RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 PROM1O43490 865 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 TMEM63AO94886 807 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 SUN1O94901 812 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 GLP2RO95838 553 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 HPXP02790 462 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 RNASE1P07998 156 aaKnown RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 FAM200BP0CF97 657 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 NR2F1P10589 423 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 AZGP1P25311 298 aaKnown RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 MSX2P35548 267 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 CD97P48960 835 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 HSD17B4P51659 736 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 JAG1P78504 1218 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 HSD11B2P80365 405 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 HGFACQ04756 655 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CDK18Q07002 472 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 NEXNQ0ZGT2 675 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 DOC2BQ14184 412 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 FRG1Q14331 258 aaKnown RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 ANKRD1Q15327 319 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 COL28A1Q2UY09 1125 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 HFEQ30201 348 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ARL6IP4Q66PJ3 421 aaKnown RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 OTUD7BQ6GQQ9 843 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 TRMT10BQ6PF06 316 aaKnown RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 KLHL24Q6TFL4 600 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 USP51Q70EK9 711 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 GAS2L3Q86XJ1 694 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.86□□□□□ -1.952e-7■□□□□ 10.1
XRN1-210ENST00000472697 NFKBIDQ8NI38 313 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 DCAF11Q8TEB1 546 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ZFPM2Q8WW38 1151 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 PTP4A1Q93096 173 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 PGAP3Q96FM1 320 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 SIPA1Q96FS4 1042 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 MASTLQ96GX5 879 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ZNF845Q96IR2 970 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 DACH2Q96NX9 599 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 NUDT22Q9BRQ3 303 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 EPC1Q9H2F5 836 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 PAK6Q9NQU5 681 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 DIAPH3Q9NSV4 1193 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms