RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 TNFSF14O43557 240 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 TLX3O43711 291 aaPredicted RBP10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 RNASEH2AO75792 299 aaKnown RBP10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 IGLV3-19P01714 112 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 VAV1P15498 845 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 CD27P26842 260 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 CTSKP43235 329 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 SYKP43405 635 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 CCT8P50990 548 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 METAP1P53582 386 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 RPS24P62847 133 aaKnown RBP10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 SUZ12Q15022 739 aaKnown RBP10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 SHBQ15464 509 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 FSCBQ5H9T9 825 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 KRT39Q6A163 491 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 NADSYN1Q6IA69 706 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 DBX2Q6ZNG2 339 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 TFAP2BQ92481 460 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 KAT5Q92993 513 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 RPL10LQ96L21 214 aaKnown RBP10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 CDK5RAP1Q96SZ6 601 aaKnown RBP10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 MYOCQ99972 504 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 GDPD2Q9HCC8 539 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 KIAA1522Q9P206 1035 aaPredicted RBP10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 XPO7Q9UIA9 1087 aaKnown RBP10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 CA5BQ9Y2D0 317 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 AK5Q9Y6K8 562 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 ASXL3Q9C0F0 2248 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 PLXNA2O75051 1894 aa10.51□□□□□ -0.73
SCAMP3-205ENST00000472397 CKAP5Q14008 2032 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 PYCARD-AS1I3L0S3 204 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 ENC1O14682 589 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 XPO1O14980 1071 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 NPC1O15118 1278 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 TIMM44O43615 452 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 LDOC1O95751 146 aaPredicted RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 ITGAVP06756 1048 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 ZNF883P0CG24 379 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 MYF5P13349 255 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 JUPP14923 745 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 ABCB4P21439 1286 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 BRD2P25440 801 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 MAT2AP31153 395 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 CSKP41240 450 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 GRK6P43250 576 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 STK19P49842 368 aaPredicted RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 BCAT1P54687 386 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 GALCP54803 685 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 TBX4P57082 545 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 DPYDQ12882 1025 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 TARDBPQ13148 414 aaKnown RBP eCLIP10.5□□□□□ -0.733e-7■■□□□ 12.4
SCAMP3-205ENST00000472397 EIF4HQ15056 248 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 SGO2Q562F6 1265 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 ADGRF1Q5T601 910 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 ZNF776Q68DI1 518 aaPredicted RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 ARHGAP17Q68EM7 881 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 PM20D1Q6GTS8 502 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 ISM2Q6H9L7 571 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 CIR1Q86X95 450 aaPredicted RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 MFN1Q8IWA4 741 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 FAM217AQ8IXS0 508 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 APCDD1Q8J025 514 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 AHI1Q8N157 1196 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 STK40Q8N2I9 435 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 FBXL13Q8NEE6 735 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 WFIKKN2Q8TEU8 576 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 IGSF8Q969P0 613 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 CCDC47Q96A33 483 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 NAF1Q96HR8 494 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 CNDP2Q96KP4 475 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 SPATA32Q96LK8 384 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 PRICKLE1Q96MT3 831 aaPredicted RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 SLC2A11Q9BYW1 496 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 NUCKS1Q9H1E3 243 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 PABPC3Q9H361 631 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 HESX1Q9UBX0 185 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 SLCO3A1Q9UIG8 710 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 INTS6Q9UL03 887 aaKnown RBP10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 CFAP45Q9UL16 551 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 NCKAP1Q9Y2A7 1128 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 CEP83Q9Y592 693 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 PCDHGB2Q9Y5G2 931 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 IGSF10Q6WRI0 2623 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 ACACAQ13085 2346 aa10.5□□□□□ -0.73
SCAMP3-205ENST00000472397 LAMA5O15230 3695 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 CABIN1Q9Y6J0 2220 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 BPTFQ12830 3046 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 SYNJ2BP-COX16A0A087WUM0 186 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 TRIM49BA6NDI0 452 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 RNF225M0QZC1 329 aaPredicted RBP10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 SDC3O75056 442 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 RHOBTB3O94955 611 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 DLDP09622 509 aaKnown RBP10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 KRT10P13645 584 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 CMA1P23946 247 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 RPL13P26373 211 aaKnown RBP10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 SLC8A1P32418 973 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 ZNF132P52740 706 aa10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 PMS1P54277 932 aaKnown RBP10.49□□□□□ -0.73
SCAMP3-205ENST00000472397 SLC8A3P57103 927 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms