RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 C1orf74Q96LT6 269 aa17.35■□□□□ 0.37
TSPO-205ENST00000472378 TBCBQ99426 244 aa17.35■□□□□ 0.37
TSPO-205ENST00000472378 TRIM5Q9C035 493 aa17.35■□□□□ 0.37
TSPO-205ENST00000472378 TKTL2Q9H0I9 626 aa17.35■□□□□ 0.37
TSPO-205ENST00000472378 PIGVQ9NUD9 493 aa17.35■□□□□ 0.37
TSPO-205ENST00000472378 ARHGEF38Q9NXL2 777 aa17.35■□□□□ 0.37
TSPO-205ENST00000472378 EBF1Q9UH73 591 aa17.35■□□□□ 0.37
TSPO-205ENST00000472378 RAB23Q9ULC3 237 aa17.35■□□□□ 0.37
TSPO-205ENST00000472378 FANCMQ8IYD8 2048 aa17.35■□□□□ 0.37
TSPO-205ENST00000472378 GOLGA6L7A0A1B0GV03 622 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 C2CD4BA6NLJ0 364 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 H0Y626 953 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 PAGE1O75459 146 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 ENDOD1O94919 500 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 PABPC1P11940 636 aaKnown RBP17.34■□□□□ 0.37
TSPO-205ENST00000472378 TDGF1P13385 188 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 CASP14P31944 242 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 STARD3Q14849 445 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 RNF43Q68DV7 783 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 PKN3Q6P5Z2 889 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 TSSK4Q6SA08 328 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 ZNF571Q7Z3V5 609 aaPredicted RBP17.34■□□□□ 0.37
TSPO-205ENST00000472378 WDR5BQ86VZ2 330 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 CCDC33Q8N5R6 958 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.34■□□□□ 0.37
TSPO-205ENST00000472378 RXFP2Q8WXD0 754 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 CFAP57Q96MR6 1250 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 HAPLN3Q96S86 360 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 NCAPGQ9BPX3 1015 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.34■□□□□ 0.37
TSPO-205ENST00000472378 CIPCQ9C0C6 399 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 MRPL47Q9HD33 250 aaKnown RBP17.34■□□□□ 0.37
TSPO-205ENST00000472378 ELOVL2Q9NXB9 296 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 KIAA1522Q9P206 1035 aaPredicted RBP17.34■□□□□ 0.37
TSPO-205ENST00000472378 STIM2Q9P246 746 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 GGA2Q9UJY4 613 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 SCINQ9Y6U3 715 aa17.34■□□□□ 0.37
TSPO-205ENST00000472378 A0A1B0GVM2 712 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 TCAF2A6NFQ2 919 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 PRRT4C9JH25 899 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 LILRB5O75023 590 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 LUC7L3O95232 432 aaKnown RBP17.33■□□□□ 0.36
TSPO-205ENST00000472378 FTLP02792 175 aaPredicted RBP17.33■□□□□ 0.36
TSPO-205ENST00000472378 SKILP12757 684 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 POLR2EP19388 210 aaKnown RBP17.33■□□□□ 0.36
TSPO-205ENST00000472378 GPD1P21695 349 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 HNRNPH3P31942 346 aaKnown RBP17.33■□□□□ 0.36
TSPO-205ENST00000472378 RPS24P62847 133 aaKnown RBP17.33■□□□□ 0.36
TSPO-205ENST00000472378 ATP11AP98196 1134 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 MESP2Q0VG99 397 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 AUHQ13825 339 aaKnown RBP17.33■□□□□ 0.36
TSPO-205ENST00000472378 BYSLQ13895 437 aaKnown RBP17.33■□□□□ 0.36
TSPO-205ENST00000472378 C11orf74Q86VG3 221 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 VSTM4Q8IW00 320 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 CARNMT1Q8N4J0 409 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 EMC1Q8N766 993 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 RPRD1AQ96P16 312 aaPredicted RBP17.33■□□□□ 0.36
TSPO-205ENST00000472378 CNPY3Q9BT09 278 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 SIK2Q9H0K1 926 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 RETREG1Q9H6L5 497 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 ABCB8Q9NUT2 735 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 FAM86C1Q9NVL1 165 aa17.33■□□□□ 0.36
TSPO-205ENST00000472378 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 TMCO5BA8MYB1 307 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 DDX3XO00571 662 aaKnown RBP eCLIP17.32■□□□□ 0.363e-7■■■■■ 28.3
TSPO-205ENST00000472378 TRIM24O15164 1050 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 AXIN1O15169 862 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 SYNCRIPO60506 623 aaKnown RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 CLDN11O75508 207 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 LMNAP02545 664 aaKnown RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 ASLP04424 464 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 HOXB2P14652 356 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 RRM1P23921 792 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 HLA-FP30511 346 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 RFC1P35251 1148 aaPredicted RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 ZNF143P52747 638 aaPredicted RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 AIF1P55008 147 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 ZNF177Q13360 481 aaPredicted RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 GEN1Q17RS7 908 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 USP39Q53GS9 565 aaKnown RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 EMC10Q5UCC4 262 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 HEATR6Q6AI08 1181 aaKnown RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 CHST9Q7L1S5 443 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 BNIPLQ7Z465 357 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 KIAA0907Q7Z7F0 614 aaPredicted RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 CNGA4Q8IV77 575 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 PRICKLE1Q96MT3 831 aaPredicted RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 PRMT1Q99873 361 aaKnown RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 BCCIPQ9P287 314 aaKnown RBP eCLIP17.32■□□□□ 0.36
TSPO-205ENST00000472378 THAP10Q9P2Z0 257 aaPredicted RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 ADAMTS1Q9UHI8 967 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 XPO7Q9UIA9 1087 aaKnown RBP17.32■□□□□ 0.36
TSPO-205ENST00000472378 R4GN57 208 aa17.32■□□□□ 0.36
TSPO-205ENST00000472378 FAM170AA1A519 330 aa17.31■□□□□ 0.36
TSPO-205ENST00000472378 SGK1O00141 431 aa17.31■□□□□ 0.36
TSPO-205ENST00000472378 ADCY5O95622 1261 aa17.31■□□□□ 0.36
TSPO-205ENST00000472378 DLDP09622 509 aaKnown RBP17.31■□□□□ 0.36
TSPO-205ENST00000472378 FNTBP49356 437 aa17.31■□□□□ 0.36
TSPO-205ENST00000472378 ST8SIA6P61647 398 aa17.31■□□□□ 0.36
TSPO-205ENST00000472378 SULT2A1Q06520 285 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms