RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ADGRG2Q8IZP9 1017 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 SLC35F6Q8N357 371 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 C17orf53Q8N3J3 647 aaPredicted RBP17.41■□□□□ 0.38
CCM2-205ENST00000472223 HJURPQ8NCD3 748 aaPredicted RBP17.41■□□□□ 0.38
CCM2-205ENST00000472223 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.41■□□□□ 0.38
CCM2-205ENST00000472223 WBP2Q969T9 261 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 EXOC4Q96A65 974 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 TBC1D31Q96DN5 1066 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 RSPRY1Q96DX4 576 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 PLA2G2FQ9BZM2 168 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 RETREG1Q9H6L5 497 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 SPHK2Q9NRA0 654 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 GPATCH2LQ9NWQ4 482 aa17.41■□□□□ 0.38
CCM2-205ENST00000472223 RCOR3Q9P2K3 495 aaPredicted RBP17.41■□□□□ 0.38
CCM2-205ENST00000472223 XPO7Q9UIA9 1087 aaKnown RBP17.41■□□□□ 0.38
CCM2-205ENST00000472223 FGF10O15520 208 aaPredicted RBP17.4■□□□□ 0.38
CCM2-205ENST00000472223 GREM1O60565 184 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 TCF4P15884 667 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 EPHB2P29323 1055 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 DNA2P51530 1060 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 TDGQ13569 410 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 NADSYN1Q6IA69 706 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 FBXL22Q6P050 247 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 RFWD3Q6PCD5 774 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 CPNE8Q86YQ8 564 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 FAM217AQ8IXS0 508 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 SLC44A3Q8N4M1 653 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 EXD1Q8NHP7 514 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 HES6Q96HZ4 224 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 LRRC3BQ96PB8 259 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 XPO6Q96QU8 1125 aaKnown RBP17.4■□□□□ 0.38
CCM2-205ENST00000472223 BBS2Q9BXC9 721 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 ZYG11BQ9C0D3 744 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 LINC00597Q9H2U6 94 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 EBF3Q9H4W6 596 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 TMPRSS4Q9NRS4 437 aa17.4■□□□□ 0.38
CCM2-205ENST00000472223 PPARGC1AQ9UBK2 798 aaKnown RBP17.4■□□□□ 0.38
CCM2-205ENST00000472223 CTAGE9A4FU28 777 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 TBL1XO60907 577 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 KDELR1P24390 212 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 CASQ1P31415 396 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 HCAR3P49019 387 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 COPS2P61201 443 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 ZP2Q05996 745 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 RUNX3Q13761 415 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 DHCR24Q15392 516 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 EML3Q32P44 896 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 ITPRIPL2Q3MIP1 535 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 PREPLQ4J6C6 727 aaPredicted RBP17.39■□□□□ 0.37
CCM2-205ENST00000472223 ATP13A4Q4VNC1 1196 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 FAM133BQ5BKY9 247 aaKnown RBP17.39■□□□□ 0.37
CCM2-205ENST00000472223 MPP7Q5T2T1 576 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 SEL1L2Q5TEA6 688 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 TXNRD3NBQ6F5E7 133 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 VSIG1Q86XK7 387 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 PYROXD2Q8N2H3 581 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 RSAD2Q8WXG1 361 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 CD101Q93033 1021 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 RNF25Q96BH1 459 aaPredicted RBP17.39■□□□□ 0.37
CCM2-205ENST00000472223 ZFYVE19Q96K21 471 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 KCTD15Q96SI1 283 aaPredicted RBP17.39■□□□□ 0.37
CCM2-205ENST00000472223 PRMT1Q99873 361 aaKnown RBP17.39■□□□□ 0.37
CCM2-205ENST00000472223 FAM83CQ9BQN1 747 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 RPP25Q9BUL9 199 aaKnown RBP17.39■□□□□ 0.37
CCM2-205ENST00000472223 PRDM16Q9HAZ2 1276 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 ANLNQ9NQW6 1124 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 KLHL11Q9NVR0 708 aa17.39■□□□□ 0.37
CCM2-205ENST00000472223 PACSIN2Q9UNF0 486 aaPredicted RBP17.39■□□□□ 0.37
CCM2-205ENST00000472223 EYSQ5T1H1 3165 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.38■□□□□ 0.37
CCM2-205ENST00000472223 NEDD8-MDP1E9PL57 170 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 H0Y626 953 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 KCNK3O14649 394 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 TRDMT1O14717 391 aaKnown RBP17.38■□□□□ 0.37
CCM2-205ENST00000472223 CLDN11O75508 207 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 LRIG2O94898 1065 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 ADH5P11766 374 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 ZFXP17010 805 aaPredicted RBP17.38■□□□□ 0.37
CCM2-205ENST00000472223 SLC6A4P31645 630 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 GGCXP38435 758 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 VCPP55072 806 aaKnown RBP17.38■□□□□ 0.37
CCM2-205ENST00000472223 OXCT1P55809 520 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 ETF1P62495 437 aaKnown RBP17.38■□□□□ 0.37
CCM2-205ENST00000472223 ZNF177Q13360 481 aaPredicted RBP17.38■□□□□ 0.37
CCM2-205ENST00000472223 CA9Q16790 459 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 LY6G5CQ5SRR4 150 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 TRIM68Q6AZZ1 485 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 CYP4V2Q6ZWL3 525 aaPredicted RBP17.38■□□□□ 0.37
CCM2-205ENST00000472223 RIN3Q8TB24 985 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 KRT35Q92764 455 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 NAPGQ99747 312 aaPredicted RBP17.38■□□□□ 0.37
CCM2-205ENST00000472223 ZNF670Q9BS34 389 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 ECT2Q9H8V3 914 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 PCDH18Q9HCL0 1135 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.38■□□□□ 0.37
CCM2-205ENST00000472223 SNX10Q9Y5X0 201 aa17.38■□□□□ 0.37
CCM2-205ENST00000472223 XIRP2A4UGR9 3374 aa17.37■□□□□ 0.37
CCM2-205ENST00000472223 A0A1B0GVM2 712 aa17.37■□□□□ 0.37
CCM2-205ENST00000472223 TCAF2A6NFQ2 919 aa17.37■□□□□ 0.37
CCM2-205ENST00000472223 DRGXA6NNA5 263 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms