RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 CHODLQ9H9P2 273 aa4.31□□□□□ -1.72
PTCD3-209ENST00000472044 SH3BP4Q9P0V3 963 aa4.31□□□□□ -1.72
PTCD3-209ENST00000472044 ZNF69Q9UC07 566 aa4.31□□□□□ -1.72
PTCD3-209ENST00000472044 B3GNT3Q9Y2A9 372 aa4.31□□□□□ -1.72
PTCD3-209ENST00000472044 AGAP5A6NIR3 686 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 C16orf96A6NNT2 1141 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 GCATO75600 419 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 KRT38O76015 456 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 KAT7O95251 611 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 SGPL1O95470 568 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 IGLV2-14P01704 120 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 SLPIP03973 132 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 SLC3A2P08195 630 aaKnown RBP4.3□□□□□ -1.72
PTCD3-209ENST00000472044 STAT6P42226 847 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 RCAN1P53805 252 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 ELLP55199 621 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-209ENST00000472044 DMWDQ09019 674 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 PROSER3Q2NL68 480 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 GLE1Q53GS7 698 aaKnown RBP4.3□□□□□ -1.72
PTCD3-209ENST00000472044 SERPINA13PQ6UXR4 307 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 RANBP10Q6VN20 620 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 MMS22LQ6ZRQ5 1243 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 AMIGO2Q86SJ2 522 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 FSIP1Q8NA03 581 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 PNISRQ8TF01 805 aaKnown RBP4.3□□□□□ -1.72
PTCD3-209ENST00000472044 RITA1Q96K30 269 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 SENP7Q9BQF6 1050 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 HTATIP2Q9BUP3 242 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 PRDM13Q9H4Q3 707 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 SFXN1Q9H9B4 322 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 PLEKHA2Q9HB19 425 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 PDE11AQ9HCR9 933 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 MAFFQ9ULX9 164 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 RCE1Q9Y256 329 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 DNAJC16Q9Y2G8 782 aa4.3□□□□□ -1.72
PTCD3-209ENST00000472044 COPG1Q9Y678 874 aaKnown RBP4.3□□□□□ -1.72
PTCD3-209ENST00000472044 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-209ENST00000472044 RRN3P2A6NIE6 340 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 HOXC11O43248 304 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-209ENST00000472044 ENO1P06733 434 aaKnown RBP4.29□□□□□ -1.72
PTCD3-209ENST00000472044 PYGLP06737 847 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 RXRAP19793 462 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 CCR5P51681 352 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 VAMP2P63027 116 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 UBE3AQ05086 875 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 RNASELQ05823 741 aaKnown RBP4.29□□□□□ -1.72
PTCD3-209ENST00000472044 CHRNDQ07001 517 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 SLC14A1Q13336 389 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 PDCLQ13371 301 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 ANKRD1Q15327 319 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 INTS11Q5TA45 600 aaKnown RBP4.29□□□□□ -1.72
PTCD3-209ENST00000472044 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 FCRLBQ6BAA4 426 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 CCDC70Q6NSX1 233 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 CHSY1Q86X52 802 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 EXD3Q8N9H8 876 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 CEP70Q8NHQ1 597 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 CLEC4CQ8WTT0 213 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 SORCS2Q96PQ0 1159 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 NUAK2Q9H093 628 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 SLC22A11Q9NSA0 550 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 TMEM160Q9NX00 188 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 GGA3Q9NZ52 723 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 SLC13A4Q9UKG4 626 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 RRP7AQ9Y3A4 280 aaKnown RBP4.29□□□□□ -1.72
PTCD3-209ENST00000472044 LMTK3Q96Q04 1460 aa4.29□□□□□ -1.72
PTCD3-209ENST00000472044 EYA2O00167 538 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 AKAP8O43823 692 aaKnown RBP4.28□□□□□ -1.72
PTCD3-209ENST00000472044 TSPAN3O60637 253 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 RFPL3SP0C7P2 107 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 NHLRC4P0CG21 123 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-209ENST00000472044 CYP2D6P10635 497 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 PNPLA4P41247 253 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 SLC37A1P57057 533 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 TUBA4AP68366 448 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 NHLH1Q02575 133 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 TFF2Q03403 129 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 CERKLQ49MI3 558 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-209ENST00000472044 ZNF484Q5JVG2 852 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 PRAMEF17Q5VTA0 474 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 ARHGEF25Q86VW2 580 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 TMTC1Q8IUR5 882 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 ADGRF3Q8IZF5 1079 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 ENDOVQ8N8Q3 282 aaKnown RBP4.28□□□□□ -1.72
PTCD3-209ENST00000472044 SEMA6DQ8NFY4 1073 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 CELF1Q92879 486 aaKnown RBP4.28□□□□□ -1.72
PTCD3-209ENST00000472044 ARRDC3Q96B67 414 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 MAELQ96JY0 434 aaKnown RBP4.28□□□□□ -1.72
PTCD3-209ENST00000472044 ASB2Q96Q27 587 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 REEP2Q9BRK0 252 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 ARHGAP39Q9C0H5 1083 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 PRDM16Q9HAZ2 1276 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 WASH6PQ9NQA3 447 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 ASNSD1Q9NWL6 643 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 MTMR4Q9NYA4 1195 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 ANAPC4Q9UJX5 808 aa4.28□□□□□ -1.72
PTCD3-209ENST00000472044 HEMK1Q9Y5R4 338 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-209ENST00000472044 VWA3AA6NCI4 1184 aa4.27□□□□□ -1.73
PTCD3-209ENST00000472044 LRRC3CA6NJW4 275 aa4.27□□□□□ -1.73
PTCD3-209ENST00000472044 TISP43B9A030 160 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms