RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 KRT5P13647 590 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 VAV1P15498 845 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 TFE3P19532 575 aaPredicted RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 CSRP1P21291 193 aaKnown RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 GGCXP38435 758 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 HARS2P49590 506 aaKnown RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 CSNK1EP49674 416 aaKnown RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 TBX4P57082 545 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 RPS14P62263 151 aaKnown RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 SIM1P81133 766 aaPredicted RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 SHC2P98077 582 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 GFPT1Q06210 699 aaPredicted RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 LMAN2Q12907 356 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 ARHGAP44Q17R89 818 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 MPPE1Q53F39 396 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 DCAF6Q58WW2 860 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 SPDYCQ5MJ68 293 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 ARTNQ5T4W7 220 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 DCAF12L1Q5VU92 463 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 DAB2IPQ5VWQ8 1189 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 MBLAC2Q68D91 279 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 MSANTD2Q6P1R3 559 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 C14orf80Q86SX3 495 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 TADA2BQ86TJ2 420 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 SLCO6A1Q86UG4 719 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 TAC4Q86UU9 113 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 C11orf74Q86VG3 221 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 CREBRFQ8IUR6 639 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 PASD1Q8IV76 773 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 ELOA2Q8IYF1 753 aaPredicted RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 APCDD1Q8J025 514 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 ARHGAP18Q8N392 663 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 TTC39CQ8N584 583 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 OR52K2Q8NGK3 314 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 RNF139Q8WU17 664 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 ZNF606Q8WXB4 792 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 ORAI3Q9BRQ5 295 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 SLC4A5Q9BY07 1137 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 SIX2Q9NPC8 291 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 PLCB1Q9NQ66 1216 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 ANLNQ9NQW6 1124 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 CNGB3Q9NQW8 809 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 ST7Q9NRC1 585 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 GGA2Q9UJY4 613 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 KIAA1257Q9ULG3 409 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 HBS1LQ9Y450 684 aaKnown RBP8.4□□□□□ -1.06
USP48-207ENST00000471752 SNX10Q9Y5X0 201 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 PCDH15Q96QU1 1955 aa8.4□□□□□ -1.06
USP48-207ENST00000471752 TNRC6BQ9UPQ9 1833 aaKnown RBP8.4□□□□□ -1.07
USP48-207ENST00000471752 SYNJ2BP-COX16A0A087WUM0 186 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 A0A1B0GVT2 93 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 METTL12A8MUP2 240 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 I6L893 689 aaPredicted RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 FOXN3O00409 490 aaPredicted RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 SYNCRIPO60506 623 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 NDUFS2O75306 463 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 ZNF217O75362 1048 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 AFPP02771 609 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 PABPC1P11940 636 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 CEACAM1P13688 526 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 TBXAS1P24557 533 aaPredicted RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 CLCN1P35523 988 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 CSKP41240 450 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 STK19P49842 368 aaPredicted RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 GCNT1Q02742 428 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 GRIK2Q13002 908 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 PAK1Q13153 545 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 EIF4EBP2Q13542 120 aaPredicted RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 CAMK2GQ13555 558 aaPredicted RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 BYSLQ13895 437 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 BECN1Q14457 450 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 PLEKHG6Q3KR16 790 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 FNDC3BQ53EP0 1204 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 RAB6CQ53S08 254 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 C2CD6Q53TS8 623 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 RAP1GAP2Q684P5 730 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 SERPINA13PQ6UXR4 307 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 SLC36A4Q6YBV0 504 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 NUDT18Q6ZVK8 323 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 METTL3Q86U44 580 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 SCML4Q8N228 414 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 CARNMT1Q8N4J0 409 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP48-207ENST00000471752 DNASE2BQ8WZ79 361 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 DDX1Q92499 740 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 GATA6Q92908 595 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 RPL10LQ96L21 214 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 HSFY1Q96LI6 401 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 CPXM1Q96SM3 734 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 CDK5RAP1Q96SZ6 601 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 FAM129BQ96TA1 746 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 MAGEB5Q9BZ81 275 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 RAB6CQ9H0N0 254 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 COX16Q9P0S2 106 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 BTBD3Q9Y2F9 522 aa8.39□□□□□ -1.07
USP48-207ENST00000471752 FNDC3AQ9Y2H6 1198 aaKnown RBP8.39□□□□□ -1.07
USP48-207ENST00000471752 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP48-207ENST00000471752 APC2O95996 2303 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 SIN3BO75182 1162 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms