RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 DPY30Q9C005 99 aa8.78□□□□□ -1
CD47-204ENST00000471694 PRR23D1E9PI22 279 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 TK2O00142 265 aa8.78□□□□□ -1
CD47-204ENST00000471694 RAD51BO15315 384 aa8.78□□□□□ -1
CD47-204ENST00000471694 SUPT7LO94864 414 aa8.78□□□□□ -1
CD47-204ENST00000471694 CCNDBP1O95273 360 aa8.78□□□□□ -1
CD47-204ENST00000471694 PRR23D2P0DMB1 279 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 UBA1P22314 1058 aaKnown RBP8.78□□□□□ -1
CD47-204ENST00000471694 KCNJ5P48544 419 aa8.78□□□□□ -1
CD47-204ENST00000471694 NUP107P57740 925 aa8.78□□□□□ -1
CD47-204ENST00000471694 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 DDR2Q16832 855 aa8.78□□□□□ -1
CD47-204ENST00000471694 CBWD6Q4V339 395 aa8.78□□□□□ -1
CD47-204ENST00000471694 RASIP1Q5U651 963 aa8.78□□□□□ -1
CD47-204ENST00000471694 FAM129CQ86XR2 697 aa8.78□□□□□ -1
CD47-204ENST00000471694 MYLPFQ96A32 169 aa8.78□□□□□ -1
CD47-204ENST00000471694 KIAA1143Q96AT1 154 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 MTMR8Q96EF0 704 aa8.78□□□□□ -1
CD47-204ENST00000471694 TRIM9Q9C026 710 aa8.78□□□□□ -1
CD47-204ENST00000471694 TKTL2Q9H0I9 626 aa8.78□□□□□ -1
CD47-204ENST00000471694 ZDHHC4Q9NPG8 344 aa8.78□□□□□ -1
CD47-204ENST00000471694 CISHQ9NSE2 258 aa8.78□□□□□ -1
CD47-204ENST00000471694 KIAA1522Q9P206 1035 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 DIP2BQ9P265 1576 aa8.78□□□□□ -1
CD47-204ENST00000471694 HMGB3O15347 200 aaKnown RBP8.78□□□□□ -1
CD47-204ENST00000471694 PEX1O43933 1283 aa8.78□□□□□ -1
CD47-204ENST00000471694 FGRP09769 529 aa8.78□□□□□ -1
CD47-204ENST00000471694 TIE1P35590 1138 aa8.78□□□□□ -1
CD47-204ENST00000471694 CTSOP43234 321 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 NRIP1P48552 1158 aa8.78□□□□□ -1
CD47-204ENST00000471694 ETF1P62495 437 aaKnown RBP8.78□□□□□ -1
CD47-204ENST00000471694 NPAS4Q8IUM7 802 aa8.78□□□□□ -1
CD47-204ENST00000471694 STAMBPL1Q96FJ0 436 aa8.78□□□□□ -1
CD47-204ENST00000471694 ERVK-11Q9UQG0 969 aa8.78□□□□□ -1
CD47-204ENST00000471694 FAM205CA6NFA0 338 aa8.78□□□□□ -1
CD47-204ENST00000471694 FEN1P39748 380 aaKnown RBP8.78□□□□□ -1
CD47-204ENST00000471694 CASP4P49662 377 aa8.78□□□□□ -1
CD47-204ENST00000471694 ACAD10Q6JQN1 1059 aa8.78□□□□□ -1
CD47-204ENST00000471694 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.78□□□□□ -1
CD47-204ENST00000471694 PCYOX1LQ8NBM8 494 aa8.78□□□□□ -1
CD47-204ENST00000471694 MTFMTQ96DP5 389 aaKnown RBP8.78□□□□□ -1
CD47-204ENST00000471694 KLHL25Q9H0H3 589 aa8.78□□□□□ -1
CD47-204ENST00000471694 IMP3Q9NV31 184 aaKnown RBP8.78□□□□□ -1
CD47-204ENST00000471694 FAM187AA6NFU0 413 aa8.77□□□□□ -1
CD47-204ENST00000471694 CD2BP2O95400 341 aaKnown RBP8.77□□□□□ -1
CD47-204ENST00000471694 PTPN1P18031 435 aaKnown RBP8.77□□□□□ -1
CD47-204ENST00000471694 SHMT1P34896 483 aa8.77□□□□□ -1
CD47-204ENST00000471694 DUSP4Q13115 394 aa8.77□□□□□ -1
CD47-204ENST00000471694 MTM1Q13496 603 aa8.77□□□□□ -1
CD47-204ENST00000471694 DHX34Q14147 1143 aaKnown RBP8.77□□□□□ -1
CD47-204ENST00000471694 PAGE2BQ5JRK9 111 aa8.77□□□□□ -1
CD47-204ENST00000471694 ERMARDQ5T6L9 678 aa8.77□□□□□ -1
CD47-204ENST00000471694 IRGCQ6NXR0 463 aa8.77□□□□□ -1
CD47-204ENST00000471694 PRUNE1Q86TP1 453 aa8.77□□□□□ -1
CD47-204ENST00000471694 SPATS2Q86XZ4 545 aaKnown RBP8.77□□□□□ -1
CD47-204ENST00000471694 ADGRG2Q8IZP9 1017 aa8.77□□□□□ -1
CD47-204ENST00000471694 DPP10Q8N608 796 aa8.77□□□□□ -1
CD47-204ENST00000471694 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1
CD47-204ENST00000471694 IGDCC4Q8TDY8 1250 aa8.77□□□□□ -1
CD47-204ENST00000471694 CAPSLQ8WWF8 208 aa8.77□□□□□ -1
CD47-204ENST00000471694 SHCBP1LQ9BZQ2 653 aa8.77□□□□□ -1
CD47-204ENST00000471694 CCSER1Q9C0I3 900 aa8.77□□□□□ -1
CD47-204ENST00000471694 DMTF1Q9Y222 760 aa8.77□□□□□ -1
CD47-204ENST00000471694 PCDHB3Q9Y5E6 796 aa8.77□□□□□ -1
CD47-204ENST00000471694 FRMPD1Q5SYB0 1578 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 MED24O75448 989 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 SEC24DO94855 1032 aaPredicted RBP8.77□□□□□ -1.01
CD47-204ENST00000471694 CAPN1P07384 714 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 JMJD7P0C870 316 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 SCNN1AP37088 669 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 PSEN1P49768 467 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 ZNF445P59923 1031 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 VSNL1P62760 191 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 GJB7Q6PEY0 223 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 CENPLQ8N0S6 344 aaPredicted RBP8.77□□□□□ -1.01
CD47-204ENST00000471694 PHPT1Q9NRX4 125 aaPredicted RBP8.77□□□□□ -1.01
CD47-204ENST00000471694 SIK3Q9Y2K2 1263 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 NRXN1Q9ULB1 1477 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 MMP13P45452 471 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 KBTBD12Q3ZCT8 623 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 PRCCQ92733 491 aaPredicted RBP8.77□□□□□ -1.01
CD47-204ENST00000471694 CDH9Q9ULB4 789 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 NEU2Q9Y3R4 380 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 INSL6Q9Y581 213 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 DIP2CQ9Y2E4 1556 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 MYO1CO00159 1063 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 MAT2AP31153 395 aaKnown RBP8.77□□□□□ -1.01
CD47-204ENST00000471694 OCA2Q04671 838 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 PTK7Q13308 1070 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 NDUFA9Q16795 377 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 STRADBQ9C0K7 418 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 CDH7Q9ULB5 785 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.77□□□□□ -1.01
CD47-204ENST00000471694 HES2Q9Y543 173 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 A0A0A6YYK5 440 aaPredicted RBP8.77□□□□□ -1.01
CD47-204ENST00000471694 A6NCN8 305 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 ACKR2O00590 384 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 UNC13BO14795 1591 aa8.77□□□□□ -1.01
CD47-204ENST00000471694 DUSP11O75319 330 aaKnown RBP8.77□□□□□ -1.01
CD47-204ENST00000471694 MMEP08473 750 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms