RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 SLC8A2Q9UPR5 921 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 SHROOM4Q9ULL8 1493 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 SERINC4A6NH21 518 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 WNT1P04628 370 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 RFPL3SP0C7P2 107 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 PLA2G2AP14555 144 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 ARRB2P32121 409 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 ZXDBP98169 803 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 TTLL5Q6EMB2 1281 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 LRIG3Q6UXM1 1119 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 ANKRD13AQ8IZ07 590 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 RBMXL3Q8N7X1 1067 aaKnown RBP4.35□□□□□ -1.71
RBM39-228ENST00000471635 FAM47BQ8NA70 645 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 GLIS1Q8NBF1 620 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 LPAR1Q92633 364 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 NUDT22Q9BRQ3 303 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 TMEM204Q9BSN7 226 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 MYLK2Q9H1R3 596 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 FBXO28Q9NVF7 368 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 LAMP3Q9UQV4 416 aa4.35□□□□□ -1.71
RBM39-228ENST00000471635 FAM234BA2RU67 622 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 C4orf47A7E2U8 309 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 J3KTA2 159 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 RHODO00212 210 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 TNFRSF13BO14836 293 aaPredicted RBP4.34□□□□□ -1.71
RBM39-228ENST00000471635 NPC1O15118 1278 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 SLC28A2O43868 658 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 KAT7O95251 611 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 SGPL1O95470 568 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 TGFB3P10600 412 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 HARSP12081 509 aaKnown RBP4.34□□□□□ -1.71
RBM39-228ENST00000471635 SLC5A1P13866 664 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 HOXA11P31270 313 aaPredicted RBP4.34□□□□□ -1.71
RBM39-228ENST00000471635 NSUN2Q08J23 767 aaKnown RBP eCLIP4.34□□□□□ -1.71
RBM39-228ENST00000471635 PMS2P11Q13670 270 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 ARL13BQ3SXY8 428 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 COBLL1Q53SF7 1204 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 ISM2Q6H9L7 571 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 HMBOX1Q6NT76 420 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 MSANTD2Q6P1R3 559 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 RASGRP3Q8IV61 690 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 ADHFE1Q8IWW8 467 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 FBXL14Q8N1E6 418 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 TMEM174Q8WUU8 243 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 NPIPB3Q92617 1050 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 CENPIQ92674 756 aaPredicted RBP4.34□□□□□ -1.71
RBM39-228ENST00000471635 ZNF347Q96SE7 839 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 WDR83Q9BRX9 315 aaKnown RBP4.34□□□□□ -1.71
RBM39-228ENST00000471635 COLEC11Q9BWP8 271 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 SLCO5A1Q9H2Y9 848 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 FSCN3Q9NQT6 498 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 RGL1Q9NZL6 768 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 PCDHB7Q9Y5E2 793 aa4.34□□□□□ -1.71
RBM39-228ENST00000471635 CNTN5O94779 1100 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 NFATC1O95644 943 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 SLC37A1P57057 533 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 IFIT5Q13325 482 aaKnown RBP4.33□□□□□ -1.72
RBM39-228ENST00000471635 CSHL1Q14406 222 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 MAPKAPK3Q16644 382 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 KIAA1755Q5JYT7 1200 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 ASPHD1Q5U4P2 390 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 HIBCHQ6NVY1 386 aaPredicted RBP4.33□□□□□ -1.72
RBM39-228ENST00000471635 TTC30AQ86WT1 665 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 SLC22A17Q8WUG5 538 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 OIT3Q8WWZ8 545 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 PPP1R10Q96QC0 940 aaKnown RBP4.33□□□□□ -1.72
RBM39-228ENST00000471635 GDF15Q99988 308 aa4.33□□□□□ -1.72
RBM39-228ENST00000471635 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.33□□□□□ -1.72
RBM39-228ENST00000471635 UBE2J1Q9Y385 318 aaPredicted RBP4.33□□□□□ -1.72
RBM39-228ENST00000471635 PNMA6EA0A0J9YXQ4 647 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 PRSS44E7EML9 344 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 DHHO43323 396 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 PPP6R2O75170 966 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 TAF5LO75529 589 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 ITGA5P08648 1049 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 TNFRSF8P28908 595 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 WDR93Q6P2C0 686 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 FBXO38Q6PIJ6 1188 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 SRFBP1Q8NEF9 429 aaKnown RBP4.32□□□□□ -1.72
RBM39-228ENST00000471635 OR52N4Q8NGI2 321 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 MIB2Q96AX9 1013 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 NTPCRQ9BSD7 190 aaKnown RBP4.32□□□□□ -1.72
RBM39-228ENST00000471635 SF3B5Q9BWJ5 86 aaKnown RBP4.32□□□□□ -1.72
RBM39-228ENST00000471635 EIF2AQ9BY44 585 aaKnown RBP4.32□□□□□ -1.72
RBM39-228ENST00000471635 ARHGAP39Q9C0H5 1083 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 STARD7Q9NQZ5 370 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 INSL5Q9Y5Q6 135 aa4.32□□□□□ -1.72
RBM39-228ENST00000471635 RPS10-NUDT3A0A1W2PQS6 291 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 GXYLT2A0PJZ3 443 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 SPTLC2O15270 562 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 PMM2O15305 246 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 NCK2O43639 380 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 MYL3P08590 195 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 PEPDP12955 493 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 TGM2P21980 687 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 SHC2P98077 582 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 SAFBQ15424 915 aaKnown RBP eCLIP4.31□□□□□ -1.72
RBM39-228ENST00000471635 SLC35G1Q2M3R5 365 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 ATG9BQ674R7 924 aa4.31□□□□□ -1.72
RBM39-228ENST00000471635 ANKRD40Q6AI12 368 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms