RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MCEEQ96PE7 176 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 HAPLN3Q96S86 360 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 FAM126AQ9BYI3 521 aaPredicted RBP15.82■□□□□ 0.12
SDC3-203ENST00000471567 ABHD10Q9NUJ1 306 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 CLEC4EQ9ULY5 219 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 MUC6Q6W4X9 2439 aa15.82■□□□□ 0.12
SDC3-203ENST00000471567 PRRT4C9JH25 899 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 H0Y858 1186 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 TIMM44O43615 452 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 CACNA1HO95180 2353 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 SP9P0CG40 484 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 CHRM1P11229 460 aaPredicted RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 DESP17661 470 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 HOXA6P31267 233 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 EIF4A3P38919 411 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 ADKP55263 362 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 SEC13P55735 322 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 RPL7AP62424 266 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 RPS24P62847 133 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 SATB1Q01826 763 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 CSTF1Q05048 431 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 AUHQ13825 339 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 EIF4HQ15056 248 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 C15orf59Q2T9L4 293 aaPredicted RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 C2orf27AQ580R0 203 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 RABGAP1LQ5R372 815 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 FBXL22Q6P050 247 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 PKN3Q6P5Z2 889 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 ALKBH5Q6P6C2 394 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 TRMT11Q7Z4G4 463 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 ANKS1BQ7Z6G8 1248 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 CCDC117Q8IWD4 279 aaPredicted RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 SFTPA1Q8IWL2 248 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.81■□□□□ 0.12
SDC3-203ENST00000471567 FIBINQ8TAL6 211 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 WFIKKN2Q8TEU8 576 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 ZNF653Q96CK0 615 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 MYEOVQ96EZ4 313 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 CNPY3Q9BT09 278 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 MRPL47Q9HD33 250 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 CNOT8Q9UFF9 292 aaKnown RBP15.81■□□□□ 0.12
SDC3-203ENST00000471567 RAPGEFL1Q9UHV5 662 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 HS3ST4Q9Y661 456 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 SCINQ9Y6U3 715 aa15.81■□□□□ 0.12
SDC3-203ENST00000471567 NPC1O15118 1278 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 HNRNPLP14866 589 aaKnown RBP eCLIP15.8■□□□□ 0.12
SDC3-203ENST00000471567 TIE1P35590 1138 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 ATXN1P54253 815 aaKnown RBP15.8■□□□□ 0.12
SDC3-203ENST00000471567 NRLP54845 237 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 CDO1Q16878 200 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 GEN1Q17RS7 908 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 ASTE1Q2TB18 679 aaPredicted RBP15.8■□□□□ 0.12
SDC3-203ENST00000471567 ARL13BQ3SXY8 428 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 C5orf22Q49AR2 442 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 EMC10Q5UCC4 262 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 KIAA0907Q7Z7F0 614 aaPredicted RBP15.8■□□□□ 0.12
SDC3-203ENST00000471567 FAM131BQ86XD5 332 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 DNAAF5Q86Y56 855 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 MFN1Q8IWA4 741 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 ZNF513Q8N8E2 541 aaPredicted RBP15.8■□□□□ 0.12
SDC3-203ENST00000471567 IL17RCQ8NAC3 791 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 FNIP1Q8TF40 1166 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 FAM172AQ8WUF8 416 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 UCMAQ8WVF2 138 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 NELL1Q92832 810 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 SIK2Q9H0K1 926 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 ANLNQ9NQW6 1124 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 STIM2Q9P246 746 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 MMP17Q9ULZ9 603 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 NENFQ9UMX5 172 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 SLC8A2Q9UPR5 921 aa15.8■□□□□ 0.12
SDC3-203ENST00000471567 A0A1B0GVM2 712 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 TCAF2A6NFQ2 919 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 TMEM191CA6NGB0 347 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 I6L893 689 aaPredicted RBP15.79■□□□□ 0.12
SDC3-203ENST00000471567 K7ESF4 209 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 CCP110O43303 1012 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 LUC7L3O95232 432 aaKnown RBP15.79■□□□□ 0.12
SDC3-203ENST00000471567 KLF8O95600 359 aaPredicted RBP15.79■□□□□ 0.12
SDC3-203ENST00000471567 PABPC1P11940 636 aaKnown RBP15.79■□□□□ 0.12
SDC3-203ENST00000471567 TDGF1P13385 188 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 HLA-FP30511 346 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 ADRA1BP35368 520 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 HDAC4P56524 1084 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 DMC1Q14565 340 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 SLC18A3Q16572 532 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 EOGTQ5NDL2 527 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 CCDC122Q5T0U0 273 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 SH3PXD2AQ5TCZ1 1133 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 LRRC31Q6UY01 552 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 CFAP52Q8N1V2 620 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 CAMKK1Q8N5S9 505 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 ALLCQ8N6M5 410 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 ATOH1Q92858 354 aaPredicted RBP15.79■□□□□ 0.12
SDC3-203ENST00000471567 NTAN1Q96AB6 310 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 RPRD1AQ96P16 312 aaPredicted RBP15.79■□□□□ 0.12
SDC3-203ENST00000471567 DEF6Q9H4E7 631 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 ABCB8Q9NUT2 735 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 C2orf42Q9NWW7 574 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 ELOVL2Q9NXB9 296 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms