RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PRKCSHP14314 528 aaPredicted RBP7.17□□□□□ -1.26
HDAC1-204ENST00000471488 HOXD9P28356 352 aaPredicted RBP7.17□□□□□ -1.26
HDAC1-204ENST00000471488 ATICP31939 592 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 SLC8A1P32418 973 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 PIK3CAP42336 1068 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 HARS2P49590 506 aaKnown RBP7.17□□□□□ -1.26
HDAC1-204ENST00000471488 NXPH1P58417 271 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 ASIC1P78348 528 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 STAT4Q14765 748 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 PSMD6Q15008 389 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 ZNF394Q53GI3 561 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 RNF219Q5W0B1 726 aaPredicted RBP7.17□□□□□ -1.26
HDAC1-204ENST00000471488 SPOPLQ6IQ16 392 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 RFWD3Q6PCD5 774 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.17□□□□□ -1.26
HDAC1-204ENST00000471488 ATG14Q6ZNE5 492 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 CCDC73Q6ZRK6 1079 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 SCD5Q86SK9 330 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 CCDC117Q8IWD4 279 aaPredicted RBP7.17□□□□□ -1.26
HDAC1-204ENST00000471488 AHI1Q8N157 1196 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 CARNMT1Q8N4J0 409 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 OXR1Q8N573 874 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 XXYLT1Q8NBI6 393 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 OR2T34Q8NGX1 318 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 MAPK15Q8TD08 544 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 WFIKKN2Q8TEU8 576 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 RNF139Q8WU17 664 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 KLK6Q92876 244 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 TMA16Q96EY4 203 aaKnown RBP7.17□□□□□ -1.26
HDAC1-204ENST00000471488 CYFIP2Q96F07 1278 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 CDK5RAP1Q96SZ6 601 aaKnown RBP7.17□□□□□ -1.26
HDAC1-204ENST00000471488 ORAI3Q9BRQ5 295 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 CALN1Q9BXU9 219 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 SLC2A11Q9BYW1 496 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 DPH1Q9BZG8 443 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 XYLT2Q9H1B5 865 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 MMRN2Q9H8L6 949 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 POLR1BQ9H9Y6 1135 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 FBRSQ9HAH7 460 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 AGPAT3Q9NRZ7 376 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 DACH1Q9UI36 760 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 CLIC4Q9Y696 253 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 KNTC1P50748 2209 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 A0A1B0GVM2 712 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 CPED1A4D0V7 1026 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 TTC34A8MYJ7 566 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 PAPSS1O43252 624 aaPredicted RBP7.16□□□□□ -1.26
HDAC1-204ENST00000471488 BNIP3LO60238 219 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 NTRK1P04629 796 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 FAM163BP0C2L3 166 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 ALPPL2P10696 532 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 ACP1P24666 158 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 CD70P32970 193 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 PSEN1P49768 467 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 SGSHP51688 502 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 ERVPABLB-1P60509 514 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 YWHAGP61981 247 aaKnown RBP eCLIP7.16□□□□□ -1.26
HDAC1-204ENST00000471488 PPP2CBP62714 309 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 PPP2CAP67775 309 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 KCNJ12Q14500 433 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 PROX2Q3B8N5 592 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 KLHDC10Q6PID8 442 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 ZNF574Q6ZN55 896 aaPredicted RBP7.16□□□□□ -1.26
HDAC1-204ENST00000471488 USP30Q70CQ3 517 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 USP53Q70EK8 1073 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 SND1Q7KZF4 910 aaKnown RBP eCLIP7.16□□□□□ -1.26
HDAC1-204ENST00000471488 PRPF39Q86UA1 669 aaKnown RBP7.16□□□□□ -1.26
HDAC1-204ENST00000471488 ADIPOR2Q86V24 386 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 SPATS2Q86XZ4 545 aaKnown RBP7.16□□□□□ -1.26
HDAC1-204ENST00000471488 JAMLQ86YT9 394 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 MFN1Q8IWA4 741 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 ZC3H3Q8IXZ2 948 aaKnown RBP7.16□□□□□ -1.26
HDAC1-204ENST00000471488 NDRG1Q92597 394 aaKnown RBP7.16□□□□□ -1.26
HDAC1-204ENST00000471488 EDEM1Q92611 657 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 EXTL1Q92935 676 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 ARRDC3Q96B67 414 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 ATXN7L3BQ96GX2 97 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 HIC2Q96JB3 615 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 RSPH9Q9H1X1 276 aaPredicted RBP7.16□□□□□ -1.26
HDAC1-204ENST00000471488 CAAP1Q9H8G2 361 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 CSNK1G1Q9HCP0 422 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 FOXD4L1Q9NU39 408 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 UCKL1Q9NWZ5 548 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 SEPT3Q9UH03 358 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 SFMBT1Q9UHJ3 866 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 SCML1Q9UN30 329 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 SMC3Q9UQE7 1217 aa7.16□□□□□ -1.26
HDAC1-204ENST00000471488 CKAP5Q14008 2032 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 COL12A1Q99715 3063 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 GOLGA6L7A0A1B0GV03 622 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 A0A1W2PR77 199 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 TYW5A2RUC4 315 aaKnown RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 LRRIQ3A6PVS8 624 aaPredicted RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 HHLA1C9JL84 531 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 K7ENP7 123 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 SLC31A1O15431 190 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 MSI1O43347 362 aaKnown RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 MAGEC1O60732 1142 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 RTN2O75298 545 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 FAM87AP0C7U9 286 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms