RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 NUP205Q92621 2012 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 SYCE3A1L190 88 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 KCNU1A8MYU2 1149 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 GOLGA8SH3BPF8 625 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 M0QYT0 321 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 CCR1P32246 355 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 CD70P32970 193 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 MATKP42679 507 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 ID4P47928 161 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 NOMO3P69849 1222 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 CDR2Q01850 454 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 CREB5Q02930 508 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 LMNB2Q03252 620 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 EIF4EBP2Q13542 120 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-218ENST00000470942 CSRP2Q16527 193 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 KLHL40Q2TBA0 621 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 XYLT1Q86Y38 959 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 AHI1Q8N157 1196 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 FRMD1Q8N878 549 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 ZNF557Q8N988 423 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-218ENST00000470942 CYB5D2Q8WUJ1 264 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 MYEOVQ96EZ4 313 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 CALCOCO1Q9P1Z2 691 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 PLA2G4CQ9UP65 541 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.26■□□□□ 0.19
HDAC6-218ENST00000470942 DMXL1Q9Y485 3027 aa16.26■□□□□ 0.19
HDAC6-218ENST00000470942 F5H5T6 163 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 H0Y626 953 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 TEX33O43247 280 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 SYNCRIPO60506 623 aaKnown RBP16.25■□□□□ 0.19
HDAC6-218ENST00000470942 EPHX1P07099 455 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 CHRNB2P17787 502 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 POLR2EP19388 210 aaKnown RBP16.25■□□□□ 0.19
HDAC6-218ENST00000470942 NDUFV2P19404 249 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 PTMSP20962 102 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 DHPSP49366 369 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-218ENST00000470942 SULT1E1P49888 294 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 FMO1Q01740 532 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 CDH18Q13634 790 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 MAP7D1Q3KQU3 841 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 FILIP1LQ4L180 1135 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 FNDC3BQ53EP0 1204 aaKnown RBP16.25■□□□□ 0.19
HDAC6-218ENST00000470942 PMS2CLQ68D20 193 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 MBLAC2Q68D91 279 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 KIAA1324Q6UXG2 1013 aaKnown RBP16.25■□□□□ 0.19
HDAC6-218ENST00000470942 SERPINA13PQ6UXR4 307 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 SND1Q7KZF4 910 aaKnown RBP eCLIP16.25■□□□□ 0.19
HDAC6-218ENST00000470942 ADIPOR2Q86V24 386 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.25■□□□□ 0.19
HDAC6-218ENST00000470942 FIBINQ8TAL6 211 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 SLC6A17Q9H1V8 727 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 RRN3Q9NYV6 651 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 STAP1Q9ULZ2 295 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 PCDHGA5Q9Y5G8 931 aa16.25■□□□□ 0.19
HDAC6-218ENST00000470942 CKAP5Q14008 2032 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 CEP250Q9BV73 2442 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 PRR5-ARHGAP8B1AHC4 643 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 LUC7L3O95232 432 aaKnown RBP16.24■□□□□ 0.19
HDAC6-218ENST00000470942 CYP1A1P04798 512 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-218ENST00000470942 ATP5BP06576 529 aaKnown RBP16.24■□□□□ 0.19
HDAC6-218ENST00000470942 PRKCHP24723 683 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 SCNN1AP37088 669 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 MPLP40238 635 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 ARHGAP8P85298 464 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 LMAN2Q12907 356 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 ENPP2Q13822 863 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 RSPO4Q2I0M5 234 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-218ENST00000470942 FUT11Q495W5 492 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 RNF43Q68DV7 783 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 PRR23CQ6ZRP0 262 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 LPCAT2Q7L5N7 544 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 KIAA0907Q7Z7F0 614 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-218ENST00000470942 TMEFF1Q8IYR6 380 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 RMDN1Q96DB5 314 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 NPY6RQ99463 290 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 FUCA2Q9BTY2 467 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 CD248Q9HCU0 757 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 RTN4Q9NQC3 1192 aaKnown RBP16.24■□□□□ 0.19
HDAC6-218ENST00000470942 SEPT11Q9NVA2 429 aaKnown RBP16.24■□□□□ 0.19
HDAC6-218ENST00000470942 MBD1Q9UIS9 605 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-218ENST00000470942 CYP8B1Q9UNU6 501 aa16.24■□□□□ 0.19
HDAC6-218ENST00000470942 ZNF217O75362 1048 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 ZNF806P0C7X5 589 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 HLA-EP13747 358 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 DEUP1Q05D60 604 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 RABGAP1LQ5R372 815 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 TRIM72Q6ZMU5 477 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 MMS22LQ6ZRQ5 1243 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 ARMCX6Q7L4S7 300 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 CYP2U1Q7Z449 544 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 PHLDB2Q86SQ0 1253 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 C12orf50Q8NA57 414 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-218ENST00000470942 SLC30A5Q8TAD4 765 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 MRGPRX1Q96LB2 322 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 TBCBQ99426 244 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 PRMT1Q99873 361 aaKnown RBP16.23■□□□□ 0.19
HDAC6-218ENST00000470942 C11orf70Q9BRQ4 267 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 SIK2Q9H0K1 926 aa16.23■□□□□ 0.19
HDAC6-218ENST00000470942 SMOC1Q9H4F8 434 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms