RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TLE3Q04726 772 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 RNASELQ05823 741 aaKnown RBP4.46□□□□□ -1.7
BRCA2-202ENST00000470094 SF3A3Q12874 501 aaKnown RBP eCLIP4.46□□□□□ -1.7
BRCA2-202ENST00000470094 RBMS2Q15434 407 aaKnown RBP4.46□□□□□ -1.7
BRCA2-202ENST00000470094 BTBD16Q32M84 506 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 SLC39A5Q6ZMH5 540 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 CERS3Q8IU89 383 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 RHPN2Q8IUC4 686 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 ADGRF4Q8IZF3 695 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 POF1BQ8WVV4 589 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 HMGB4Q8WW32 186 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 ZFPM2Q8WW38 1151 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 EID2BQ96D98 161 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 FCRL4Q96PJ5 515 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 RMDN3Q96TC7 470 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 RTKNQ9BST9 563 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 TMEM45AQ9NWC5 275 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 DACT1Q9NYF0 836 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 HERC5Q9UII4 1024 aaKnown RBP4.46□□□□□ -1.7
BRCA2-202ENST00000470094 RAB21Q9UL25 225 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 TRPC5Q9UL62 973 aaPredicted RBP4.46□□□□□ -1.7
BRCA2-202ENST00000470094 CNTN6Q9UQ52 1028 aa4.46□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3DA0A087WVF3 549 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3IA0A087WXS9 549 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3EA0A087X179 549 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3KA0A087X1G2 549 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3BA6NDS4 549 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3FA6NER0 549 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 EFCAB8A8MWE9 144 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3LB9A6J9 549 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 F8W810 466 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TRIM38O00635 465 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 SOCS2O14508 198 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 PPP6R2O75170 966 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 CNOT3O75175 753 aaKnown RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 ACTL6BO94805 426 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 RFPL3SP0C7P2 107 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3HP0C7X1 549 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 SERPINF1P36955 418 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 RPL15P61313 204 aaKnown RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 RBM6P78332 1123 aaKnown RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 GALNT1Q10472 559 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 CHAF1AQ13111 956 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 BLMHQ13867 455 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TRIM60Q495X7 471 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 LIPMQ5VYY2 423 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3GQ6DHY5 549 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3CQ6IPX1 549 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TMEM88Q6PEY1 159 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 ZNF474Q6S9Z5 364 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 KLHL17Q6TDP4 642 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 RAB11FIP2Q7L804 512 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TBC1D3Q8IZP1 549 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 FAM47BQ8NA70 645 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 HMCESQ96FZ2 354 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 LTV1Q96GA3 475 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 TMEM120AQ9BXJ8 343 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 SFXN1Q9H9B4 322 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 MOV10Q9HCE1 1003 aaKnown RBP4.45□□□□□ -1.7
BRCA2-202ENST00000470094 SLC12A4Q9UP95 1085 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 SLC8A2Q9UPR5 921 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 AFG3L2Q9Y4W6 797 aa4.45□□□□□ -1.7
BRCA2-202ENST00000470094 FAM90A18PA6NE21 464 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 FAM90A16PA6NEW6 464 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 FAM90A9PA6NNJ1 464 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 SLC38A8A6NNN8 435 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 FAM90A5PA8MXJ8 464 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 ACKR2O00590 384 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 CNTN5O94779 1100 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 KAT7O95251 611 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 BMP15O95972 392 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 CSTBP04080 98 aaKnown RBP4.44□□□□□ -1.7
BRCA2-202ENST00000470094 CYP3A4P08684 503 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 TMEM191BP0C7N4 346 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 FAM90A15PP0C7V4 464 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 FAM90A14PP0C7W9 464 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 GYS1P13807 737 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 PRF1P14222 555 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 TGM2P21980 687 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 CCDC38Q502W7 563 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 GORABQ5T7V8 394 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 NFRKBQ6P4R8 1299 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 CCDC117Q8IWD4 279 aaPredicted RBP4.44□□□□□ -1.7
BRCA2-202ENST00000470094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.44□□□□□ -1.7
BRCA2-202ENST00000470094 EXOC8Q8IYI6 725 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 TRMOQ9BU70 441 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 TUBB6Q9BUF5 446 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 HTATIP2Q9BUP3 242 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 MECRQ9BV79 373 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 BRD8Q9H0E9 1235 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 MYH16Q9H6N6 1097 aa4.44□□□□□ -1.7
BRCA2-202ENST00000470094 PAPOLBQ9NRJ5 636 aaKnown RBP4.44□□□□□ -1.7
BRCA2-202ENST00000470094 LIN7CQ9NUP9 197 aaKnown RBP4.44□□□□□ -1.7
BRCA2-202ENST00000470094 ZNF335Q9H4Z2 1342 aaPredicted RBP4.44□□□□□ -1.7
BRCA2-202ENST00000470094 LOC102724159A0A0B4J2E5 919 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 MBD3L5A6NJ08 208 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 UGDHO60701 494 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 ALDOCP09972 364 aaKnown RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 PEPDP12955 493 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 IGFBP2P18065 325 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms