RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 DLDP09622 509 aaKnown RBP16.92■□□□□ 0.3
COL9A3-208ENST00000469802 CEACAM1P13688 526 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 ARID5AQ03989 594 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 GFPT1Q06210 699 aaPredicted RBP16.92■□□□□ 0.3
COL9A3-208ENST00000469802 SEMA3BQ13214 749 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 MS4A13Q5J8X5 152 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 WDTC1Q8N5D0 677 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 CADM4Q8NFZ8 388 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 FIBINQ8TAL6 211 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 ADAM32Q8TC27 787 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 DNASE2BQ8WZ79 361 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 MYO19Q96H55 970 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 DDX50Q9BQ39 737 aaKnown RBP16.92■□□□□ 0.3
COL9A3-208ENST00000469802 NUCKS1Q9H1E3 243 aaKnown RBP16.92■□□□□ 0.3
COL9A3-208ENST00000469802 THAP9Q9H5L6 903 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 FBRSQ9HAH7 460 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 POPDC2Q9HBU9 364 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 TJP2Q9UDY2 1190 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 SUSD2Q9UGT4 822 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 PCDHGC3Q9UN70 934 aa16.92■□□□□ 0.3
COL9A3-208ENST00000469802 ARHGAP33O14559 1287 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 OXTRP30559 389 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 RPS24P62847 133 aaKnown RBP16.91■□□□□ 0.3
COL9A3-208ENST00000469802 YWHAZP63104 245 aaKnown RBP16.91■□□□□ 0.3
COL9A3-208ENST00000469802 ZNF252P-AS1Q0IIN9 211 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 MAN2A1Q16706 1144 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 ARHGAP44Q17R89 818 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 UAP1L1Q3KQV9 507 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 DPCR1Q3MIW9 517 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 FNDC3BQ53EP0 1204 aaKnown RBP16.91■□□□□ 0.3
COL9A3-208ENST00000469802 WDR45BQ5MNZ6 344 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 SYCP2LQ5T4T6 812 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 DPY19L2P1Q6NXN4 242 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 PIP4P1Q86T03 277 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 CACUL1Q86Y37 369 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 MFN1Q8IWA4 741 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 ZNF366Q8N895 744 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 CPXM1Q96SM3 734 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 GPR174Q9BXC1 333 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 XPO7Q9UIA9 1087 aaKnown RBP16.91■□□□□ 0.3
COL9A3-208ENST00000469802 INTS6Q9UL03 887 aaKnown RBP16.91■□□□□ 0.3
COL9A3-208ENST00000469802 PLA2G4CQ9UP65 541 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 WASF3Q9UPY6 502 aa16.91■□□□□ 0.3
COL9A3-208ENST00000469802 PLXNA2O75051 1894 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 TRUB2O95900 331 aaKnown RBP16.9■□□□□ 0.3
COL9A3-208ENST00000469802 ATP5BP06576 529 aaKnown RBP16.9■□□□□ 0.3
COL9A3-208ENST00000469802 MTIF2P46199 727 aaKnown RBP16.9■□□□□ 0.3
COL9A3-208ENST00000469802 PITX1P78337 314 aaPredicted RBP16.9■□□□□ 0.3
COL9A3-208ENST00000469802 TAF5Q15542 800 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 MIIPQ5JXC2 388 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 MINDY1Q8N5J2 469 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 TTC17Q96AE7 1141 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 SLC2A13Q96QE2 648 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 PCED1AQ9H1Q7 454 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 LHX5Q9H2C1 402 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 PRSS16Q9NQE7 514 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 DNAAF2Q9NVR5 837 aaKnown RBP16.9■□□□□ 0.3
COL9A3-208ENST00000469802 ASNSD1Q9NWL6 643 aa16.9■□□□□ 0.3
COL9A3-208ENST00000469802 FRYQ5TBA9 3013 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 TYW5A2RUC4 315 aaKnown RBP16.89■□□□□ 0.29
COL9A3-208ENST00000469802 MEI4A8MW99 385 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 CAPN9O14815 690 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 GJB3O75712 270 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 LUC7L3O95232 432 aaKnown RBP16.89■□□□□ 0.29
COL9A3-208ENST00000469802 MOCS2O96007 188 aaPredicted RBP16.89■□□□□ 0.29
COL9A3-208ENST00000469802 APOEP02649 317 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 GLI1P08151 1106 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 POLR2EP19388 210 aaKnown RBP16.89■□□□□ 0.29
COL9A3-208ENST00000469802 ERCC5P28715 1186 aaPredicted RBP16.89■□□□□ 0.29
COL9A3-208ENST00000469802 USP8P40818 1118 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 ZBTB16Q05516 673 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 ARID5BQ14865 1188 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 DCAF6Q58WW2 860 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 ZC3H12AQ5D1E8 599 aaKnown RBP16.89■□□□□ 0.29
COL9A3-208ENST00000469802 FSCBQ5H9T9 825 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 CREBRFQ8IUR6 639 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 RGL4Q8IZJ4 473 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 DEFB124Q8NES8 71 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 C1orf216Q8TAB5 229 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 BTN2A3PQ96KV6 586 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 MRGPRX3Q96LB0 322 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 NUP58Q9BVL2 599 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 GTPBP2Q9BX10 602 aaKnown RBP16.89■□□□□ 0.29
COL9A3-208ENST00000469802 STIM2Q9P246 746 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 DOCK4Q8N1I0 1966 aa16.89■□□□□ 0.29
COL9A3-208ENST00000469802 METTL12A8MUP2 240 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 KCNU1A8MYU2 1149 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 ASLP04424 464 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 SYPP08247 313 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 ACADMP11310 421 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 GNSP15586 552 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 MAOBP27338 520 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 CSKP41240 450 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 ATXN3P54252 364 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-208ENST00000469802 RPS14P62263 151 aaKnown RBP16.88■□□□□ 0.29
COL9A3-208ENST00000469802 CDH18Q13634 790 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 PLEKHG6Q3KR16 790 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 DCAF12L1Q5VU92 463 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 OLFML1Q6UWY5 402 aa16.88■□□□□ 0.29
COL9A3-208ENST00000469802 CLEC17AQ6ZS10 378 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms