RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 TRIM24O15164 1050 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 KAT7O95251 611 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 APODP05090 189 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 HMBSP08397 361 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 RALAP11233 206 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 PSEN1P49768 467 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 YWHAGP61981 247 aaKnown RBP eCLIP18.32■□□□□ 0.52
MRPL28-208ENST00000469744 GAD2Q05329 585 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 GABPB1Q06547 395 aaPredicted RBP18.32■□□□□ 0.52
MRPL28-208ENST00000469744 ADIGQ0VDE8 80 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 EFEMP1Q12805 493 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 GLIPR1L2Q4G1C9 344 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 EMC10Q5UCC4 262 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 KLHDC10Q6PID8 442 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 TPGS1Q6ZTW0 290 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 CEP68Q76N32 757 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 SYT13Q7L8C5 426 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 NOP9Q86U38 636 aaKnown RBP18.32■□□□□ 0.52
MRPL28-208ENST00000469744 RASGEF1CQ8N431 466 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 RBBP8NLQ8NC74 664 aaPredicted RBP18.32■□□□□ 0.52
MRPL28-208ENST00000469744 BHMTQ93088 406 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 ACDQ96AP0 544 aa18.32■□□□□ 0.52
MRPL28-208ENST00000469744 LSM7Q9UK45 103 aaKnown RBP18.32■□□□□ 0.52
MRPL28-208ENST00000469744 TTC7AQ9ULT0 858 aaPredicted RBP18.32■□□□□ 0.52
MRPL28-208ENST00000469744 RALGAPA1Q6GYQ0 2036 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 NEDD8-MDP1E9PL57 170 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 PIK3R2O00459 728 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 HOXC11O43248 304 aaPredicted RBP18.31■□□□□ 0.52
MRPL28-208ENST00000469744 STC2O76061 302 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 ZBED1O96006 694 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 FTLP02792 175 aaPredicted RBP18.31■□□□□ 0.52
MRPL28-208ENST00000469744 CYP11B1P15538 503 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 RGS7P49802 495 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 GPS2Q13227 327 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 BTBD8Q5XKL5 378 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 C11orf63Q6NUN7 778 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 BHLHA9Q7RTU4 235 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 DAAM2Q86T65 1068 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 ETFBKMTQ8IXQ9 262 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 PHTF2Q8N3S3 785 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 ACBD3Q9H3P7 528 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 LRRC4Q9HBW1 653 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 SEPT11Q9NVA2 429 aaKnown RBP18.31■□□□□ 0.52
MRPL28-208ENST00000469744 CLIC5Q9NZA1 410 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 GMEB2Q9UKD1 530 aa18.31■□□□□ 0.52
MRPL28-208ENST00000469744 KCNK3O14649 394 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 TULP3O75386 442 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 PAEPP09466 180 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 CHRM1P11229 460 aaPredicted RBP18.3■□□□□ 0.52
MRPL28-208ENST00000469744 TIE1P35590 1138 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 USP8P40818 1118 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 EIF2DP41214 584 aaKnown RBP18.3■□□□□ 0.52
MRPL28-208ENST00000469744 FMO1Q01740 532 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 LAIR1Q6GTX8 287 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 Q6ZNB5 142 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 TADA2BQ86TJ2 420 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 ALLCQ8N6M5 410 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 MS4A14Q96JA4 679 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 PSMB7Q99436 277 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 LRRC1Q9BTT6 524 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 BBS2Q9BXC9 721 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 THAP2Q9H0W7 228 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 PARD6AQ9NPB6 346 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 TAS2R14Q9NYV8 317 aa18.3■□□□□ 0.52
MRPL28-208ENST00000469744 TMCO5BA8MYB1 307 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 CCDC188H7C350 402 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 M0QYV0 167 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 BUB1BO60566 1050 aaPredicted RBP18.29■□□□□ 0.52
MRPL28-208ENST00000469744 RPP40O75818 363 aaKnown RBP18.29■□□□□ 0.52
MRPL28-208ENST00000469744 KLF8O95600 359 aaPredicted RBP18.29■□□□□ 0.52
MRPL28-208ENST00000469744 APBB3O95704 486 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 KLKB1P03952 638 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 LCP1P13796 627 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 CNR2P34972 360 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 GRIA2P42262 883 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 SPEM2Q0P670 501 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 PKDCCQ504Y2 493 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 PM20D1Q6GTS8 502 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 PPP1R2P3Q6NXS1 205 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 C8orf74Q6P047 294 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 LCLAT1Q6UWP7 414 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 SIX6OS1Q8N1H7 587 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 ARHGAP18Q8N392 663 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 FAM160A2Q8N612 972 aaPredicted RBP18.29■□□□□ 0.52
MRPL28-208ENST00000469744 GAB3Q8WWW8 586 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 DDX1Q92499 740 aaKnown RBP18.29■□□□□ 0.52
MRPL28-208ENST00000469744 EDEM1Q92611 657 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 ARHGEF26Q96DR7 871 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 P2RY11Q96G91 374 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 PCDHB18PQ96TA0 734 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 DNAJC17Q9NVM6 304 aaKnown RBP18.29■□□□□ 0.52
MRPL28-208ENST00000469744 PLK2Q9NYY3 685 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 MARCH2Q9P0N8 246 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 STIM2Q9P246 746 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 DEC1Q9P2X7 70 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 KIAA1257Q9ULG3 409 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 MMP17Q9ULZ9 603 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 USP18Q9UMW8 372 aa18.29■□□□□ 0.52
MRPL28-208ENST00000469744 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.29■□□□□ 0.52
MRPL28-208ENST00000469744 TBC1D3BA6NDS4 549 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms