RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 RAB30Q15771 203 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 AFMIDQ63HM1 303 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 POLNQ7Z5Q5 900 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 APBB1IPQ7Z5R6 666 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-208ENST00000469585 SERINC5Q86VE9 423 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 SLC35B2Q8TB61 432 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 CEP170P1Q96L14 293 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 SAMD11Q96NU1 681 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 LSM14BQ9BX40 385 aaKnown RBP6.84□□□□□ -1.31
PTCD3-208ENST00000469585 FTHL17Q9BXU8 183 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 NT5C3AQ9H0P0 336 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 UNC45AQ9H3U1 944 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 RNPEPQ9H4A4 650 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 MOCS1Q9NZB8 636 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 CALCOCO1Q9P1Z2 691 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 LRWD1Q9UFC0 647 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 RAPGEFL1Q9UHV5 662 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 TBX21Q9UL17 535 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 GINS2Q9Y248 185 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 PDE4DIPQ5VU43 2346 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 SMIM35A0A1B0GVV1 85 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 ABHD14A-ACY1A0A1B0GW23 586 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 DENND3A2RUS2 1198 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 ARHGEF35A5YM69 484 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 TRIM43BA6NCK2 446 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 LRRC14BA6NHZ5 514 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 CXorf49A8MYA2 514 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 STX6O43752 255 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 SLC37A4O43826 429 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 IQCF3P0C7M6 154 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 CKBP12277 381 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 MUTP22033 750 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 SFPQP23246 707 aaKnown RBP eCLIP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 KLRC1P26715 233 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 CCT6AP40227 531 aaKnown RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 PRPHP41219 470 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 UBA7P41226 1012 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 TECP42680 631 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 ALDH1A3P47895 512 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 CTXN1P60606 82 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 CYP4A11Q02928 519 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 TLE1Q04724 770 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 FZD5Q13467 585 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 CUL4AQ13619 759 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 GBX1Q14549 363 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 PLCB4Q15147 1175 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 ZRSR1Q15695 479 aaKnown RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 XKR9Q5GH70 373 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 TMEM63BQ5T3F8 832 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 ARL6IP4Q66PJ3 421 aaKnown RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 ANKS6Q68DC2 871 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 MTHFD1LQ6UB35 978 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 DOK3Q7L591 496 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 GPRIN1Q7Z2K8 1008 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 CCDC60Q8IWA6 550 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 DCBLD1Q8N8Z6 715 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 PPP1R35Q8TAP8 253 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 ETNPPLQ8TBG4 499 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 PSPC1Q8WXF1 523 aaKnown RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 CRYGNQ8WXF5 182 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 KAT2BQ92831 832 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 RGMAQ96B86 450 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 TRIM43Q96BQ3 446 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 AK8Q96MA6 479 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 LXNQ9BS40 222 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 IFIH1Q9BYX4 1025 aaKnown RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 GCOM2Q9BZD3 368 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 TUFT1Q9NNX1 390 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 KCNMB3Q9NPA1 279 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 C1orf112Q9NSG2 853 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 GJB4Q9NTQ9 266 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 HECAQ9UBI9 543 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-208ENST00000469585 CFAP45Q9UL16 551 aa6.83□□□□□ -1.32
PTCD3-208ENST00000469585 PHLPP2Q6ZVD8 1323 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 IGSF9BQ9UPX0 1349 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 IGKV6D-21A0A0A0MT36 114 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 GOLGA6L4A6NEF3 574 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 ASAP2O43150 1006 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 PJA2O43164 708 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 TEX33O43247 280 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 ERLIN2O94905 339 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 CCNE2O96020 404 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 FTLP02792 175 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 STAG3L1P0CL83 205 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 YWHABP31946 246 aaKnown RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 HK3P52790 923 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 MRPS6P82932 125 aaKnown RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 PDIA5Q14554 519 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 MXD4Q14582 209 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 ICAM4Q14773 271 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 STK38Q15208 465 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 CSRP2Q16527 193 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 KHDC1Q4VXA5 237 aaKnown RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 ARHGAP29Q52LW3 1261 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 FBLN7Q53RD9 439 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 ZNF618Q5T7W0 954 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 THEMIS2Q5TEJ8 643 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 ATL3Q6DD88 541 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms