RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ARHGAP20Q9P2F6 1191 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 CLEC4EQ9ULY5 219 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 KMT2EQ8IZD2 1858 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 CCDC163A0A0D9SF12 145 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 SSU72P8A0A1W2PR75 194 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 FAM170AA1A519 330 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 PRRT4C9JH25 899 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 F5H5T6 163 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 GPD1P21695 349 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 MAPK8IP2Q13387 824 aaPredicted RBP20.71■□□□□ 0.91
NPHP4-206ENST00000468253 AUHQ13825 339 aaKnown RBP20.71■□□□□ 0.91
NPHP4-206ENST00000468253 RABGAP1LQ5R372 815 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 C10orf76Q5T2E6 689 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 EMC10Q5UCC4 262 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 RAP1GAP2Q684P5 730 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 FBXL22Q6P050 247 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 PKN3Q6P5Z2 889 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 DCUN1D2Q6PH85 259 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 ANKS1BQ7Z6G8 1248 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 CHSY1Q86X52 802 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 CNGA4Q8IV77 575 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 CCDC117Q8IWD4 279 aaPredicted RBP20.71■□□□□ 0.91
NPHP4-206ENST00000468253 SFTPA1Q8IWL2 248 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 LGI2Q8N0V4 545 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 IL17RCQ8NAC3 791 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 WFIKKN2Q8TEU8 576 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 ATOH1Q92858 354 aaPredicted RBP20.71■□□□□ 0.91
NPHP4-206ENST00000468253 CNPY3Q9BT09 278 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 ZSCAN32Q9NX65 697 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 ELOVL2Q9NXB9 296 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 MMP17Q9ULZ9 603 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 SLC8A2Q9UPR5 921 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 HS3ST4Q9Y661 456 aa20.71■□□□□ 0.91
NPHP4-206ENST00000468253 AKR1B15C9JRZ8 316 aaPredicted RBP20.7■□□□□ 0.9
NPHP4-206ENST00000468253 K7ESF4 209 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 ADRA1BP35368 520 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 SGSHP51688 502 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 OXCT1P55809 520 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 RPL7AP62424 266 aaKnown RBP20.7■□□□□ 0.9
NPHP4-206ENST00000468253 RPS24P62847 133 aaKnown RBP20.7■□□□□ 0.9
NPHP4-206ENST00000468253 ATP11AP98196 1134 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 ARL13BQ3SXY8 428 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 EOGTQ5NDL2 527 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 ALKBH5Q6P6C2 394 aaKnown RBP20.7■□□□□ 0.9
NPHP4-206ENST00000468253 FNIP1Q8TF40 1166 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 UCMAQ8WVF2 138 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 LMLNQ96KR4 655 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 PRICKLE1Q96MT3 831 aaPredicted RBP20.7■□□□□ 0.9
NPHP4-206ENST00000468253 SEMA4AQ9H3S1 761 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 MRPL47Q9HD33 250 aaKnown RBP20.7■□□□□ 0.9
NPHP4-206ENST00000468253 HCN2Q9UL51 889 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 PCDHGA2Q9Y5H1 932 aa20.7■□□□□ 0.9
NPHP4-206ENST00000468253 MIA3Q5JRA6 1907 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 A0A087X0T9 212 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 TMEM191CA6NGB0 347 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 DRGXA6NNA5 263 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 MFAP3LO75121 409 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 GJB6O95452 261 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 PLEKP08567 350 aaPredicted RBP20.69■□□□□ 0.9
NPHP4-206ENST00000468253 FAM228BP0C875 321 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 DESP17661 470 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 HLA-FP30511 346 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 NTSR1P30989 418 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 TIE1P35590 1138 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 ZNF75DP51815 510 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 SEC13P55735 322 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 NHLH1Q02575 133 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 DMC1Q14565 340 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 GEN1Q17RS7 908 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 C15orf59Q2T9L4 293 aaPredicted RBP20.69■□□□□ 0.9
NPHP4-206ENST00000468253 ASTE1Q2TB18 679 aaPredicted RBP20.69■□□□□ 0.9
NPHP4-206ENST00000468253 SDE2Q6IQ49 451 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 ZNF513Q8N8E2 541 aaPredicted RBP20.69■□□□□ 0.9
NPHP4-206ENST00000468253 ZBTB44Q8NCP5 570 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 MYEOVQ96EZ4 313 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 PPP1R9BQ96SB3 815 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 OSBPL2Q9H1P3 480 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 RETREG1Q9H6L5 497 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 ABHD10Q9NUJ1 306 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 C2orf42Q9NWW7 574 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 KIAA1522Q9P206 1035 aaPredicted RBP20.69■□□□□ 0.9
NPHP4-206ENST00000468253 STIM2Q9P246 746 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 CNOT8Q9UFF9 292 aaKnown RBP20.69■□□□□ 0.9
NPHP4-206ENST00000468253 SCINQ9Y6U3 715 aa20.69■□□□□ 0.9
NPHP4-206ENST00000468253 I6L893 689 aaPredicted RBP20.68■□□□□ 0.9
NPHP4-206ENST00000468253 LUC7L3O95232 432 aaKnown RBP20.68■□□□□ 0.9
NPHP4-206ENST00000468253 EIF4A3P38919 411 aaKnown RBP20.68■□□□□ 0.9
NPHP4-206ENST00000468253 NBL1P41271 181 aa20.68■□□□□ 0.9
NPHP4-206ENST00000468253 DGKEP52429 567 aa20.68■□□□□ 0.9
NPHP4-206ENST00000468253 ATXN1P54253 815 aaKnown RBP20.68■□□□□ 0.9
NPHP4-206ENST00000468253 ADKP55263 362 aaKnown RBP20.68■□□□□ 0.9
NPHP4-206ENST00000468253 HDAC4P56524 1084 aa20.68■□□□□ 0.9
NPHP4-206ENST00000468253 NRG1Q02297 640 aaPredicted RBP20.68■□□□□ 0.9
NPHP4-206ENST00000468253 SLC12A1Q13621 1099 aa20.68■□□□□ 0.9
NPHP4-206ENST00000468253 CRY1Q16526 586 aa20.68■□□□□ 0.9
NPHP4-206ENST00000468253 ZC3H14Q6PJT7 736 aaKnown RBP20.68■□□□□ 0.9
NPHP4-206ENST00000468253 LRRC31Q6UY01 552 aa20.68■□□□□ 0.9
NPHP4-206ENST00000468253 TMC6Q7Z403 805 aa20.68■□□□□ 0.9
NPHP4-206ENST00000468253 MFN1Q8IWA4 741 aa20.68■□□□□ 0.9
NPHP4-206ENST00000468253 CFAP52Q8N1V2 620 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms