RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 NDST3O95803 873 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 IFNA2P01563 188 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 ITGA5P08648 1049 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 IGFBP2P18065 325 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 MT3P25713 68 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 HOXA11P31270 313 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 PRIM2P49643 509 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 ANXA2RQ3ZCQ2 193 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 GLE1Q53GS7 698 aaKnown RBP3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 ARHGAP15Q53QZ3 475 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 LRIG3Q6UXM1 1119 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 DGKHQ86XP1 1220 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 DCP1BQ8IZD4 617 aaKnown RBP3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 ADGRF3Q8IZF5 1079 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 GLIS1Q8NBF1 620 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 RBM38Q9H0Z9 239 aaKnown RBP3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 AAMDCQ9H7C9 122 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 CD93Q9NPY3 652 aa3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 UBE2J1Q9Y385 318 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-209ENST00000466862 NPC1O15118 1278 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 ZSCAN9O15535 394 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 VIPP01282 170 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 RFX2P48378 723 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 NSUN2Q08J23 767 aaKnown RBP eCLIP3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 PMS2P11Q13670 270 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 RTL10Q7L3V2 364 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 GPSM1Q86YR5 675 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 FBXL14Q8N1E6 418 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 KAT2AQ92830 837 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 TTC17Q96AE7 1141 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 SNX27Q96L92 541 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 TRIM2Q9C040 744 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 RGL1Q9NZL6 768 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 ANAPC4Q9UJX5 808 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 LAMP3Q9UQV4 416 aa3.41□□□□□ -1.86
GTF3C3-209ENST00000466862 LOC105369274A0A096LPK9 316 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 LOC102723532A0A0G2JNH3 316 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 FAM234BA2RU67 622 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 FOXO6A8MYZ6 492 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 RHODO00212 210 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 PODXLO00592 558 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 PQBP1O60828 265 aaKnown RBP3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 ZC3H11AO75152 810 aaKnown RBP eCLIP3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 ATF3P18847 181 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 TGM2P21980 687 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 GSTM5P46439 218 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 STT3AP46977 705 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 SLC37A1P57057 533 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 ASIC2Q16515 512 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 SLC35G1Q2M3R5 365 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 Q6ZTC4 211 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 BEND5Q7L4P6 421 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 SKAP1Q86WV1 359 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 SPATA2LQ8IUW3 424 aaPredicted RBP3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 OR4N4Q8N0Y3 316 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 CCDC33Q8N5R6 958 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 FAM47BQ8NA70 645 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 OIT3Q8WWZ8 545 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 LPAR1Q92633 364 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 GRAMD1AQ96CP6 724 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 URB1-AS1Q96HZ7 61 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 MEIS3Q99687 375 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 HTATIP2Q9BUP3 242 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 TXNRD2Q9NNW7 524 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 DTNAQ9Y4J8 743 aa3.4□□□□□ -1.87
GTF3C3-209ENST00000466862 APOL1O14791 398 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 TAF5LO75529 589 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 EGR4Q05215 589 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 KEAP1Q14145 624 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 MAPKAPK3Q16644 382 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 KDELC2Q7Z4H8 507 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 SLC22A17Q8WUG5 538 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 ATP2A3Q93084 1043 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 SIRT3Q9NTG7 399 aaPredicted RBP3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 ICKQ9UPZ9 632 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 MAN2B2Q9Y2E5 1009 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 PCDHB7Q9Y5E2 793 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 INSL5Q9Y5Q6 135 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 CKAP5Q14008 2032 aa3.39□□□□□ -1.87
GTF3C3-209ENST00000466862 J3KTA2 159 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 NKX2-8O15522 239 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 NEURL1O76050 574 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 TM4SF4P48230 202 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 GAD2Q05329 585 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 LTBQ06643 244 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 SLC4A8Q2Y0W8 1093 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 TTC39AQ5SRH9 613 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 HIBCHQ6NVY1 386 aaPredicted RBP3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 SLC39A5Q6ZMH5 540 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 TRILQ7L0X0 811 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 MDGA2Q7Z553 956 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 IQCF1Q8N6M8 205 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 NEUROG1Q92886 237 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 PHF21BQ96EK2 531 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 MCRS1Q96EZ8 462 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 EIF2AQ9BY44 585 aaKnown RBP3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 TASP1Q9H6P5 420 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 STARD7Q9NQZ5 370 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 FBXO28Q9NVF7 368 aa3.38□□□□□ -1.87
GTF3C3-209ENST00000466862 KLHL42Q9P2K6 505 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms