RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 GMIPQ9P107 970 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 LIMD1Q9UGP4 676 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 NOVA2Q9UNW9 492 aaKnown RBP10.38□□□□□ -0.75
PMF1-204ENST00000466489 USP3Q9Y6I4 520 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 CAPN7Q9Y6W3 813 aa10.38□□□□□ -0.75
PMF1-204ENST00000466489 CAPN9O14815 690 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 DDX3YO15523 660 aaKnown RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 TTI1O43156 1089 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 TLR5O60602 858 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 ZNF189O75820 626 aaPredicted RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 CALCAP01258 141 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 FAM153BP0C7A2 387 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 MBL2P11226 248 aaPredicted RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 ATP5C1P36542 298 aaKnown RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 SKIV2L2P42285 1042 aaKnown RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 NSFP46459 744 aaKnown RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 LIG3P49916 1009 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 ATP1A2P50993 1020 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 YWHAGP61981 247 aaKnown RBP eCLIP10.37□□□□□ -0.75
PMF1-204ENST00000466489 PFKPQ01813 784 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 GUCY1A3Q02108 690 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 IFT88Q13099 833 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 XRCC4Q13426 336 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 TDGQ13569 410 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 HTR4Q13639 388 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 ZNF268Q14587 947 aaPredicted RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 CCNG2Q16589 344 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 FAM153CQ494X1 144 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 FAM78AQ5JUQ0 283 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 EFHC1Q5JVL4 640 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 C10orf120Q5SQS8 335 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 LRRC38Q5VT99 294 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 SNX30Q5VWJ9 437 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 TXNDC8Q6A555 127 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 ACAD10Q6JQN1 1059 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 PMF1Q6P1K2 205 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 DENND1BQ6P3S1 775 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 CCDC137Q6PK04 289 aaKnown RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 GPRIN1Q7Z2K8 1008 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 NOP9Q86U38 636 aaKnown RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 ERICH1Q86X53 443 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 SLC13A5Q86YT5 568 aaPredicted RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 ARID3BQ8IVW6 561 aaPredicted RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 UBALD2Q8IYN6 164 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 DYDC1Q8WWB3 177 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 ART4Q93070 314 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 ELSPBP1Q96BH3 223 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 SEC16BQ96JE7 1060 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 SLC4A5Q9BY07 1137 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 ULBP1Q9BZM6 244 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 KCNK12Q9HB15 430 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 TRPV4Q9HBA0 871 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 PPANQ9NQ55 473 aaKnown RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 BATF3Q9NR55 127 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 ABCC13Q9NSE7 274 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 KLC4Q9NSK0 619 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 TDP1Q9NUW8 608 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 NKIRAS1Q9NYS0 192 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 FETUBQ9UGM5 382 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 CHORDC1Q9UHD1 332 aaPredicted RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 FAM153AQ9UHL3 310 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 DNMT3LQ9UJW3 386 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 STRIP2Q9ULQ0 834 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 RPL26L1Q9UNX3 145 aaKnown RBP10.37□□□□□ -0.75
PMF1-204ENST00000466489 SORCS3Q9UPU3 1222 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 ATP8A1Q9Y2Q0 1164 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 NUMBLQ9Y6R0 609 aa10.37□□□□□ -0.75
PMF1-204ENST00000466489 XIRP2A4UGR9 3374 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 A0A0C4DFX4 3053 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 A0A1W2PQH9 124 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 ESYT3A0FGR9 886 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 CCT8L1PA6NM43 557 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 E5RJQ4 531 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 ANHXE9PGG2 379 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 PSTPIP1O43586 416 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 CDH16O75309 829 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 MOSPD3O75425 235 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 OAS1P00973 400 aaKnown RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 MMEP08473 750 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 ZDHHC11BP0C7U3 371 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 ALADP13716 330 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 TSHRP16473 764 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 DESP17661 470 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 PSMC3P17980 439 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 CALRP27797 417 aaKnown RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 ECHS1P30084 290 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 CDH5P33151 784 aaPredicted RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 COILP38432 576 aaPredicted RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 KPNA1P52294 538 aaPredicted RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 PLTPP55058 493 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 DAOAP59103 153 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 ZC3H12AQ5D1E8 599 aaKnown RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 STXBP5Q5T5C0 1151 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 PM20D1Q6GTS8 502 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 DRICH1Q6PGQ1 229 aaPredicted RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 KLHDC10Q6PID8 442 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 TMEM150AQ86TG1 271 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 TMEM110Q86TL2 294 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 RNF135Q8IUD6 432 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 GSPT2Q8IYD1 628 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms