RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 HOXA2O43364 376 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 SPAG7O75391 227 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 GLUD2P49448 558 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 TLE2Q04725 743 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 SF3A3Q12874 501 aaKnown RBP eCLIP18.81■□□□□ 0.61e-6■■■□□ 18.3
COL9A3-205ENST00000466192 NR1H3Q13133 447 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 TRIM60Q495X7 471 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 ANKRD20A2Q5SQ80 823 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 ANKRD20A1Q5TYW2 823 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 ANKRD20A3Q5VUR7 823 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 RSPO2Q6UXX9 243 aaPredicted RBP18.81■□□□□ 0.6
COL9A3-205ENST00000466192 CAND1Q86VP6 1230 aaKnown RBP18.81■□□□□ 0.6
COL9A3-205ENST00000466192 SPATS2Q86XZ4 545 aaKnown RBP18.81■□□□□ 0.6
COL9A3-205ENST00000466192 C10orf67Q8IYJ2 551 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 NUP93Q8N1F7 819 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 NPWQ8N729 165 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 CASP10Q92851 521 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 BEGAINQ9BUH8 593 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 SMOC2Q9H3U7 446 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 ACSS3Q9H6R3 686 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 OSER1Q9NX31 292 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 NUDT5Q9UKK9 219 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 A0A0A0MRY4 1105 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 OR6C75A6NL08 312 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 TRIM66O15016 1216 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 LRIG2O94898 1065 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 ATP2A2P16615 1042 aaKnown RBP18.81■□□□□ 0.6
COL9A3-205ENST00000466192 ARPP19P56211 112 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 USP46P62068 366 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 IFT88Q13099 833 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 CBLBQ13191 982 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 RTP2Q5QGT7 225 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 ARHGEF18Q6ZSZ5 1173 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 FAM43BQ6ZT52 329 aaPredicted RBP18.81■□□□□ 0.6
COL9A3-205ENST00000466192 MICALCLQ6ZW33 695 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 CCNYQ8ND76 341 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 BCL7CQ8WUZ0 217 aaPredicted RBP18.81■□□□□ 0.6
COL9A3-205ENST00000466192 SPATA13Q96N96 652 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 EPAS1Q99814 870 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 MRPL9Q9BYD2 267 aaKnown RBP18.81■□□□□ 0.6
COL9A3-205ENST00000466192 PPCSQ9HAB8 311 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 NKIRAS1Q9NYS0 192 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 RNF103O00237 685 aa18.8■□□□□ 0.6
COL9A3-205ENST00000466192 PPP1R12AO14974 1030 aaPredicted RBP18.8■□□□□ 0.6
COL9A3-205ENST00000466192 MSI1O43347 362 aaKnown RBP18.8■□□□□ 0.6
COL9A3-205ENST00000466192 MAGEA11P43364 429 aa18.8■□□□□ 0.6
COL9A3-205ENST00000466192 CACNA2D3Q8IZS8 1091 aa18.8■□□□□ 0.6
COL9A3-205ENST00000466192 C4orf33Q8N1A6 199 aa18.8■□□□□ 0.6
COL9A3-205ENST00000466192 PAFAH2Q99487 392 aa18.8■□□□□ 0.6
COL9A3-205ENST00000466192 CEP41Q9BYV8 373 aa18.8■□□□□ 0.6
COL9A3-205ENST00000466192 TRABDQ9H4I3 376 aa18.8■□□□□ 0.6
COL9A3-205ENST00000466192 ARHGEF38Q9NXL2 777 aa18.8■□□□□ 0.6
COL9A3-205ENST00000466192 SCML2Q9UQR0 700 aa18.8■□□□□ 0.6
COL9A3-205ENST00000466192 A0A1W2PPM1 405 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 CORO7P57737 925 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 SEMA5AQ13591 1074 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 KLHL38Q2WGJ6 581 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL9A3-205ENST00000466192 DENND5BQ6ZUT9 1274 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 ZNF534Q76KX8 674 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 TAS1R1Q7RTX1 841 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 MCUQ8NE86 351 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 GPR152Q8TDT2 470 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 CABS1Q96KC9 395 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 TMEM175Q9BSA9 504 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 FRMD8Q9BZ67 464 aaPredicted RBP18.79■□□□□ 0.6
COL9A3-205ENST00000466192 TCRBV9S1A1TA0A576 114 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 FAM47DPA6NHR8 397 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 TBC1D4O60343 1298 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 SOAT2O75908 522 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 TPSB2P20231 275 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 EPHB2P29323 1055 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 STX2P32856 288 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 WASHC5Q12768 1159 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 TPSAB1Q15661 275 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 CFAP36Q96G28 342 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 OSBPL2Q9H1P3 480 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 CRISPLD1Q9H336 500 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 FETUBQ9UGM5 382 aa18.79■□□□□ 0.6
COL9A3-205ENST00000466192 TCP11X1B4DZS4 312 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 F5H423 210 aaPredicted RBP18.78■□□□□ 0.6
COL9A3-205ENST00000466192 UPP2O95045 317 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 VNN2O95498 520 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 CPB1P15086 417 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 ZNF135P52742 658 aaPredicted RBP18.78■□□□□ 0.6
COL9A3-205ENST00000466192 RASA2Q15283 850 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 ADGRD1Q6QNK2 874 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 PDZD4Q76G19 769 aaPredicted RBP18.78■□□□□ 0.6
COL9A3-205ENST00000466192 MON1AQ86VX9 555 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 COLGALT1Q8NBJ5 622 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 TOX2Q96NM4 488 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 SMC6Q96SB8 1091 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 CRISPLD2Q9H0B8 497 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 SIK2Q9H0K1 926 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 SEPT10Q9P0V9 454 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 NEU3Q9UQ49 428 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 SLC27A5Q9Y2P5 690 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 MTMR11A4FU01 709 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 KIAA0754O94854 1291 aa18.78■□□□□ 0.6
COL9A3-205ENST00000466192 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms