RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 RNF103O00237 685 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 ZNF195O14628 629 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 SIN3BO75182 1162 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 ZNF189O75820 626 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 MGAT1P26572 445 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 MATKP42679 507 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 FRG1Q14331 258 aaKnown RBP13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 HIC1Q14526 733 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 SLC25A52Q3SY17 297 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 EFHC1Q5JVL4 640 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 ALKAL1Q6UXT8 129 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 MAVSQ7Z434 540 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 SHCBP1Q8NEM2 672 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 PPP4R1Q8TF05 950 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 TUBGCP4Q9UGJ1 667 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 ADAM28Q9UKQ2 775 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 PSAT1Q9Y617 370 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 MFSD11O43934 449 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 KCNA4P22459 653 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 HOXA11P31270 313 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 IDH3AP50213 366 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 CDK7P50613 346 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 IRX4P78413 519 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 CRADDP78560 199 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 DSG1Q02413 1049 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 PDK1Q15118 436 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 SPANXN3Q5MJ09 141 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 MARCH8Q5T0T0 291 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 C9orf57Q5W0N0 161 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 RFX8Q6ZV50 586 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 BNIPLQ7Z465 357 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 PYROXD2Q8N2H3 581 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 ECSITQ9BQ95 431 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 LBHD1Q9BQE6 289 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 LPIN3Q9BQK8 851 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 FERMT1Q9BQL6 677 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 IGSF9Q9P2J2 1179 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 SLC17A6Q9P2U8 582 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 COPG2Q9UBF2 871 aa13.12□□□□□ -0.31
ARHGEF3-204ENST00000465659 KIF3CO14782 793 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 UPP2O95045 317 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 LCP1P13796 627 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 CCDC130P13994 396 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 GP5P40197 560 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 COPAP53621 1224 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 GJC2Q5T442 439 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 GRTP1Q5TC63 336 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 NAIF1Q69YI7 327 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 SLC27A1Q6PCB7 646 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 PGM2L1Q6PCE3 622 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 LIMS2Q7Z4I7 341 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 C10orf107Q8IVU9 208 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 C7orf31Q8N865 590 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 NT5C3BQ969T7 300 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 TRAPPC9Q96Q05 1148 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 CPNE1Q99829 537 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 VTA1Q9NP79 307 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 SNTG2Q9NY99 539 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 PDP2Q9P2J9 529 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 NR2E3Q9Y5X4 410 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 DICER1Q9UPY3 1922 aaKnown RBP13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 POLBP06746 335 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 GARSP41250 739 aaKnown RBP13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 SESN2P58004 480 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 ABCE1P61221 599 aaKnown RBP13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 PDE1BQ01064 536 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 HNRNPDQ14103 355 aaKnown RBP13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 PAFAH1B3Q15102 231 aaKnown RBP13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 ATG14Q6ZNE5 492 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 ACTRT2Q8TDY3 377 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 C18orf25Q96B23 403 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 CCDC28BQ9BUN5 200 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 SYBUQ9NX95 663 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 GDAP2Q9NXN4 497 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 PPM1HQ9ULR3 514 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 SCN4AP35499 1836 aa13.11□□□□□ -0.31
ARHGEF3-204ENST00000465659 BUD23O43709 281 aaKnown RBP13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 ZNF286BP0CG31 522 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 MX2P20592 715 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 ADORA2BP29275 332 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 PRDX6P30041 224 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 GNL1P36915 607 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 PEX19P40855 299 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 CACNA2D1P54289 1103 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 DEUP1Q05D60 604 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 RASSF3Q86WH2 238 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 RNF139Q8WU17 664 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 CERS2Q96G23 380 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 TSC22D3Q99576 134 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 S100A14Q9HCY8 104 aa13.1□□□□□ -0.31
ARHGEF3-204ENST00000465659 SPATS2LQ9NUQ6 558 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms