RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SCINQ9Y6U3 715 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 ANKRD62A6NC57 917 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 TBL1XO60907 577 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 PAPSS2O95340 614 aaPredicted RBP21.03■□□□□ 0.96
SKA3-205ENST00000465471 KIR2DL1P43626 348 aaPredicted RBP21.03■□□□□ 0.96
SKA3-205ENST00000465471 RPS24P62847 133 aaKnown RBP21.03■□□□□ 0.96
SKA3-205ENST00000465471 ZNF252P-AS1Q0IIN9 211 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 CDO1Q16878 200 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 C5orf22Q49AR2 442 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 CCDC122Q5T0U0 273 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 DCUN1D2Q6PH85 259 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 FAM131BQ86XD5 332 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 ZNF683Q8IZ20 524 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 LGI2Q8N0V4 545 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.03■□□□□ 0.96
SKA3-205ENST00000465471 CCDC26Q8TAB7 109 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 USP33Q8TEY7 942 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 FNIP1Q8TF40 1166 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 CNPY3Q9BT09 278 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 HCN2Q9UL51 889 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 STARD13Q9Y3M8 1113 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 ATG2BQ96BY7 2078 aa21.03■□□□□ 0.96
SKA3-205ENST00000465471 CACNA1HO95180 2353 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 ANTXRLA6NF34 631 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 F5H5T6 163 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 FECHP22830 423 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 AUHQ13825 339 aaKnown RBP21.02■□□□□ 0.96
SKA3-205ENST00000465471 ACBD5Q5T8D3 534 aaPredicted RBP21.02■□□□□ 0.96
SKA3-205ENST00000465471 FBXL22Q6P050 247 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 KIAA0907Q7Z7F0 614 aaPredicted RBP21.02■□□□□ 0.96
SKA3-205ENST00000465471 WFDC5Q8TCV5 224 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 LMLNQ96KR4 655 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 C1orf74Q96LT6 269 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 HAPLN3Q96S86 360 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 THAP2Q9H0W7 228 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 NHEJ1Q9H9Q4 299 aaPredicted RBP21.02■□□□□ 0.96
SKA3-205ENST00000465471 TMPRSS4Q9NRS4 437 aa21.02■□□□□ 0.96
SKA3-205ENST00000465471 SPATA6Q9NWH7 488 aaPredicted RBP21.02■□□□□ 0.96
SKA3-205ENST00000465471 TBC1D3BA6NDS4 549 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 PRRT4C9JH25 899 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 CYP1A2P05177 515 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 HLA-FP30511 346 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 GALCP54803 685 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 MRPS21P82921 87 aaKnown RBP21.01■□□□□ 0.95
SKA3-205ENST00000465471 TCF15Q12870 199 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 GEN1Q17RS7 908 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 C10orf76Q5T2E6 689 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 TTC39BQ5VTQ0 682 aaPredicted RBP21.01■□□□□ 0.95
SKA3-205ENST00000465471 C14orf80Q86SX3 495 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 KCNV2Q8TDN2 545 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 NTAN1Q96AB6 310 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 TRIM7Q9C029 511 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 DEF6Q9H4E7 631 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 MRPL47Q9HD33 250 aaKnown RBP21.01■□□□□ 0.95
SKA3-205ENST00000465471 C2orf42Q9NWW7 574 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 HCN4Q9Y3Q4 1203 aa21.01■□□□□ 0.95
SKA3-205ENST00000465471 MUC22E2RYF6 1773 aaPredicted RBP21■□□□□ 0.95
SKA3-205ENST00000465471 DOCK4Q8N1I0 1966 aa21■□□□□ 0.95
SKA3-205ENST00000465471 TYW5A2RUC4 315 aaKnown RBP21■□□□□ 0.95
SKA3-205ENST00000465471 TDGF1P13385 188 aa21■□□□□ 0.95
SKA3-205ENST00000465471 ADRA1BP35368 520 aa21■□□□□ 0.95
SKA3-205ENST00000465471 GGCXP38435 758 aa21■□□□□ 0.95
SKA3-205ENST00000465471 CCR3P51677 355 aa21■□□□□ 0.95
SKA3-205ENST00000465471 SCAPQ12770 1279 aa21■□□□□ 0.95
SKA3-205ENST00000465471 ANGPT1Q15389 498 aa21■□□□□ 0.95
SKA3-205ENST00000465471 NUDT18Q6ZVK8 323 aa21■□□□□ 0.95
SKA3-205ENST00000465471 ANKS1BQ7Z6G8 1248 aa21■□□□□ 0.95
SKA3-205ENST00000465471 CFAP52Q8N1V2 620 aa21■□□□□ 0.95
SKA3-205ENST00000465471 ZNF557Q8N988 423 aaPredicted RBP21■□□□□ 0.95
SKA3-205ENST00000465471 RPLP0P6Q8NHW5 317 aa21■□□□□ 0.95
SKA3-205ENST00000465471 FIBINQ8TAL6 211 aa21■□□□□ 0.95
SKA3-205ENST00000465471 IGSF8Q969P0 613 aa21■□□□□ 0.95
SKA3-205ENST00000465471 ARHGEF26Q96DR7 871 aa21■□□□□ 0.95
SKA3-205ENST00000465471 CCDC42Q96M95 316 aa21■□□□□ 0.95
SKA3-205ENST00000465471 PANX2Q96RD6 677 aa21■□□□□ 0.95
SKA3-205ENST00000465471 MYO1AQ9UBC5 1043 aa21■□□□□ 0.95
SKA3-205ENST00000465471 FBXO4Q9UKT5 387 aa21■□□□□ 0.95
SKA3-205ENST00000465471 IGLV3-10A0A075B6K4 115 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 AKR1B10O60218 316 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 ATG13O75143 517 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 LUC7L3O95232 432 aaKnown RBP20.99■□□□□ 0.95
SKA3-205ENST00000465471 COL9A1P20849 921 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 IRAK1P51617 712 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 SEC13P55735 322 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 SATB1Q01826 763 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 NRG1Q02297 640 aaPredicted RBP20.99■□□□□ 0.95
SKA3-205ENST00000465471 HSF5Q4G112 596 aaPredicted RBP20.99■□□□□ 0.95
SKA3-205ENST00000465471 RABGAP1LQ5R372 815 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 EMC10Q5UCC4 262 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 TMEM215Q68D42 235 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 MFN1Q8IWA4 741 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 ARFGAP1Q8N6T3 406 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 CCDC185Q8N715 623 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 ACDQ96AP0 544 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 VANGL2Q9ULK5 521 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 ARIH1Q9Y4X5 557 aaPredicted RBP20.99■□□□□ 0.95
SKA3-205ENST00000465471 SNX10Q9Y5X0 201 aa20.99■□□□□ 0.95
SKA3-205ENST00000465471 MYO18AQ92614 2054 aaKnown RBP20.99■□□□□ 0.95
SKA3-205ENST00000465471 A0A1B0GVM2 712 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 TCAF2A6NFQ2 919 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms