RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SCARA3Q6AZY7 606 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 DCUN1D2Q6PH85 259 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 DNAJB7Q7Z6W7 309 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-215ENST00000465457 PDZD3Q86UT5 571 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 RHOT1Q8IXI2 618 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 CAMKK1Q8N5S9 505 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 TOP6BLQ8N6T0 577 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 NIPA2Q8N8Q9 360 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 FNIP1Q8TF40 1166 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 ACBD3Q9H3P7 528 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 SYNCQ9H7C4 482 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 FSCN3Q9NQT6 498 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 OBP2AQ9NY56 170 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 SCN1AP35498 2009 aa14.41□□□□□ -0.1
HDAC6-215ENST00000465457 TCRBV5S1A1TA0A578 114 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 TMEM191CA6NGB0 347 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 KPNA7A9QM74 516 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 M0QYV0 167 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 ATG13O75143 517 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 RHOBTB1O94844 696 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 APBB3O95704 486 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 DESP17661 470 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 ATF6P18850 670 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 RPL9P32969 192 aaKnown RBP14.4□□□□□ -0.1
HDAC6-215ENST00000465457 GABRB2P47870 512 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 YWHAHQ04917 246 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-215ENST00000465457 RUNX3Q13761 415 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 DMC1Q14565 340 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 ARHGAP17Q68EM7 881 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 DENND1BQ6P3S1 775 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 HDXQ7Z353 690 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 CYP2U1Q7Z449 544 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 LIMS2Q7Z4I7 341 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 STKLD1Q8NE28 680 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 APPL2Q8NEU8 664 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 SPATA18Q8TC71 538 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 STK32AQ8WU08 396 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 ALG3Q92685 438 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 PSMG2Q969U7 264 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 C18orf8Q96DM3 657 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 TNIP3Q96KP6 325 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 LRRC1Q9BTT6 524 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 SLC46A2Q9BY10 475 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 EHD2Q9NZN4 543 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 HESX1Q9UBX0 185 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 HELZP42694 1942 aaKnown RBP14.4□□□□□ -0.1
HDAC6-215ENST00000465457 ANAPC1Q9H1A4 1944 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 PTPRBP23467 1997 aa14.4□□□□□ -0.1
HDAC6-215ENST00000465457 ATXN2Q99700 1313 aaKnown RBP14.4□□□□□ -0.1
HDAC6-215ENST00000465457 ASXL3Q9C0F0 2248 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 SIGLEC16A6NMB1 481 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 HUS1O60921 280 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 CHRNA3P32297 505 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 GALK1P51570 392 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 DGKEP52429 567 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 SIM1P81133 766 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-215ENST00000465457 PDCLQ13371 301 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 PLD1Q13393 1074 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 DHX34Q14147 1143 aaKnown RBP14.39□□□□□ -0.11
HDAC6-215ENST00000465457 PPP1R15BQ5SWA1 713 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 DCAF12L1Q5VU92 463 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 EMBQ6PCB8 327 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 CCNI2Q6ZMN8 369 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-215ENST00000465457 ARMCX6Q7L4S7 300 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 SYT13Q7L8C5 426 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 ZDHHC17Q8IUH5 632 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 KATNAL2Q8IYT4 538 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 CHCHD4Q8N4Q1 142 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 PIGKQ92643 395 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 KRT35Q92764 455 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 TWNKQ96RR1 684 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 KRT12Q99456 494 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 TASP1Q9H6P5 420 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 CYLDQ9NQC7 956 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 HOMER3Q9NSC5 361 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 SMARCAL1Q9NZC9 954 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 MAFFQ9ULX9 164 aa14.39□□□□□ -0.11
HDAC6-215ENST00000465457 FAM187AA6NFU0 413 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 A8MXQ7 604 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 M0QZQ0 153 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 PPEF2O14830 753 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 HEXIM1O94992 359 aaKnown RBP14.38□□□□□ -0.11
HDAC6-215ENST00000465457 OAZ2O95190 189 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 WARSP23381 471 aaKnown RBP14.38□□□□□ -0.11
HDAC6-215ENST00000465457 GPD2P43304 727 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 DHPSP49366 369 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-215ENST00000465457 GPS2Q13227 327 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 GPR17Q13304 367 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 NNTQ13423 1086 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 CUL1Q13616 776 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 SOWAHAQ2M3V2 549 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 PTPN20Q4JDL3 420 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 BEND6Q5SZJ8 279 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-215ENST00000465457 TMEM150AQ86TG1 271 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 CRYBG2Q8N1P7 616 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 TMEM86AQ8N2M4 240 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 WDTC1Q8N5D0 677 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 FRMD1Q8N878 549 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms